Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D13
         (403 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   0.43 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   0.99 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   0.99 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   2.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   4.0  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   6.9  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 187 DSAWLSASSFVV*LAGDGDGWLGCACTSI 101
           DS W+  +SF++     G G L   C S+
Sbjct: 30  DSNWIITNSFIIFTMQTGFGMLESGCVSL 58


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 0.99
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 113  CATKPAIAVSGKSNDERRRTQ 175
            CA+ P  A S KS   RRR Q
Sbjct: 1751 CASPPPAATSMKSVSSRRRQQ 1771


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 0.99
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 113  CATKPAIAVSGKSNDERRRTQ 175
            CA+ P  A S KS   RRR Q
Sbjct: 1747 CASPPPAATSMKSVSSRRRQQ 1767


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -1

Query: 139 DGDGWLGCACTSIISGAGGGTPCKACALHIGNGSSAMRP 23
           D D W G    +I+   G  +     +  IGNG   + P
Sbjct: 69  DVDRWNGKTFVTILRNDGVPSSLNVISNKIGNGGPLLEP 107


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 217 IFCNLPSSIFDSAW 176
           +FC +  SI D+AW
Sbjct: 6   VFCLMALSIVDAAW 19


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 217 IFCNLPSSIFDSAW 176
           +FC +  SI D+AW
Sbjct: 6   VFCLMALSIVDAAW 19


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -1

Query: 139 DGDGWLGCACTSIISGAGGGTPCKACALHIGNGSSAMRP 23
           D D W G    ++    G  +     +  IGNG   ++P
Sbjct: 72  DVDQWRGMTFVTVPRYKGVPSSLNVISEKIGNGGRLLQP 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,683
Number of Sequences: 438
Number of extensions: 1622
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)