Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D12
(366 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0496 - 29499959-29500653,29501039-29501093 32 0.16
10_08_0086 - 14729240-14729494,14730107-14730307 31 0.21
10_08_0533 + 18592177-18592581,18592674-18593906 31 0.28
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 31 0.28
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 31 0.28
03_01_0178 + 1437263-1438017,1438754-1438858,1438950-1439072,143... 31 0.37
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 30 0.64
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 30 0.64
12_01_0419 - 3316866-3318172,3318249-3318360 29 0.85
06_01_0672 - 4903126-4903219,4903322-4903430,4903620-4905096,490... 29 0.85
06_01_0216 - 1641914-1642381,1642471-1642725 29 0.85
08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167 29 1.1
03_06_0720 + 35739383-35739391,35739802-35740275,35740695-357411... 29 1.5
03_02_0183 - 6225827-6226414,6226478-6226512,6227244-6227331,622... 29 1.5
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 28 2.6
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 28 2.6
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 27 3.4
01_05_0283 - 20354065-20354154,20354579-20354890,20355566-203557... 27 3.4
09_04_0007 - 13641012-13641431,13642220-13642312,13642429-136425... 27 4.5
04_03_0053 - 10286076-10286516,10286560-10287586,10287756-102880... 27 4.5
03_06_0203 - 32337928-32338025,32338745-32338820,32338905-323389... 27 4.5
01_06_0787 - 31999632-32000045,32000128-32000214,32000295-320005... 27 4.5
01_03_0200 + 13744735-13745037,13745071-13745610,13745704-137458... 27 4.5
08_02_0880 + 22203440-22204324,22204763-22204876,22204964-222054... 27 6.0
08_02_0676 - 19943638-19943895,19944296-19944632,19944711-19945063 27 6.0
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 27 6.0
03_01_0050 + 430744-431337,432131-432249,432539-433084,433177-43... 27 6.0
02_05_0849 + 32202610-32202880,32204234-32205711,32205993-322061... 27 6.0
02_04_0243 + 21244743-21245837,21245921-21246148,21246240-212464... 27 6.0
02_02_0586 - 11861509-11861637,11863651-11863815,11864738-118648... 27 6.0
01_06_1671 - 39018929-39019027,39019310-39019439,39019529-390196... 27 6.0
01_02_0007 + 10132380-10133201 27 6.0
01_01_0575 - 4271910-4272371,4272923-4272928,4272999-4273174,427... 27 6.0
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 26 7.9
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 26 7.9
06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026 26 7.9
05_02_0058 - 6210627-6211334 26 7.9
03_04_0001 - 16208401-16208778 26 7.9
02_05_0075 - 25610386-25610508,25610529-25610583,25610801-256112... 26 7.9
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASED 178
P PPP AQ + Q QPQPQ+ P ++D
Sbjct: 79 PQTPPPPAQQQQHGPEHEHHQAQPQPQQEPPPPAQD 114
>10_08_0086 - 14729240-14729494,14730107-14730307
Length = 151
Score = 31.5 bits (68), Expect = 0.21
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = -1
Query: 288 MRPSLATTYTLSQDLLEARLAADSHSC-----LRTNVPSTPSSSLAGLVPSCGCGWSWGV 124
++ SL + DLL L S+ C L N+P S+ L P G G S GV
Sbjct: 67 LKGSLFHQVVAAADLLAPVLKQCSYHCAVLPNLCHNLPHHASTQL----PRSGDGSSSGV 122
Query: 123 SARSTASL--CCATGGGCIGV 67
A+ +L CC GGG +GV
Sbjct: 123 GAKGVPTLVACCHRGGGEVGV 143
>10_08_0533 + 18592177-18592581,18592674-18593906
Length = 545
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 68 TPMQPPPVAQHSDAVDRADTPQDQP-QPQEGTSPASE 175
+P PPP D+VD +T P +PQEG+ A E
Sbjct: 31 SPPPPPPRQPQEDSVDDEETASPSPGKPQEGSVAAEE 67
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 31.1 bits (67), Expect = 0.28
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPA-SEDEGVEGTLVRKHEWESAAKRASNR 247
P P P + + + A TP PQP T P+ + V+ R S A A+ R
Sbjct: 59 PPPPTPAVEPTLPIPPASTPPTPPQPSASTEPSTAPPPAVDDAAARSSSSSSPASAAAAR 118
Query: 248 SWDKV 262
KV
Sbjct: 119 KVRKV 123
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSP 166
P PPP SDA ++ P + P P E TSP
Sbjct: 415 PQSPPPPLP-SDAFEQPPPPPEHPPPPESTSP 445
>03_01_0178 +
1437263-1438017,1438754-1438858,1438950-1439072,
1439908-1440078,1440163-1440292,1440372-1440581,
1440675-1440773
Length = 530
Score = 30.7 bits (66), Expect = 0.37
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPA 169
P PPP AQH + +A+TP + Q PA
Sbjct: 127 PQPPPPAAQHGVQLAKAETPPPPQRTQPPVLPA 159
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 107 AVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWESAAKRA 238
A + +D P++ Q +EG +P +E+E V + E++A+ A
Sbjct: 81 AAEESDVPEESDQEEEGYAPEAEEEAEADEEVEEEAVEASAEVA 124
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 29.9 bits (64), Expect = 0.64
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGT 196
P PP A TP+ QPQ E ASE E T
Sbjct: 789 PQTPPQTPPTETPAGGAQTPEQQPQGAEAAGEASEGGASEST 830
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVE 190
P PP A+ A + PQ + P E +PA E V+
Sbjct: 338 PEPEPPAAEEPPAAEPEQEPQPETPPVESETPAEEQAPVQ 377
>06_01_0672 -
4903126-4903219,4903322-4903430,4903620-4905096,
4906200-4906538
Length = 672
Score = 29.5 bits (63), Expect = 0.85
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 68 TPMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASED 178
+P + PP + S D D P+ QP+P + ++D
Sbjct: 227 SPRRAPPPPRRSHDGDAGDRPKQQPEPVHAATTTADD 263
>06_01_0216 - 1641914-1642381,1642471-1642725
Length = 240
Score = 29.5 bits (63), Expect = 0.85
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWESAAKRASNRS 250
P PP V + + A P++ P+ +EG +E E + ++ + + R++
Sbjct: 20 PPPPPAVVEEAKEALEAPKPEEAPKAEEGEEKKAEGEKEKEKAKKERKPRARKPRSAGPH 79
Query: 251 WDKVYVVAKDGRMAFYKDQKAYNASP 328
+ + K+ MA + KA +SP
Sbjct: 80 HPPYFEMIKEAIMALDGNGKA-GSSP 104
>08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167
Length = 422
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 243 LEARLAADSHSCLRTNVPSTPSSSLAGLVPSCGCGWSW 130
++AR H LR + P +PS++ A + G+SW
Sbjct: 213 VQARQGVQRHGTLRCSSPCSPSTAAAPAYTTARTGYSW 250
>03_06_0720 +
35739383-35739391,35739802-35740275,35740695-35741122,
35741273-35741351
Length = 329
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVE 190
P+ PPP + S+ +RA Q QPQ + G SPA+ + ++
Sbjct: 213 PLSPPPPSS-SNPSERAWQQQQQPQ-RAGKSPAAASDAMD 250
>03_02_0183 -
6225827-6226414,6226478-6226512,6227244-6227331,
6228892-6228900
Length = 239
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 206 CVLMSPQHLHPRWRDLCPPAVVVGLGVCRRGP 111
C+L SP+H+ R R L PP+ +G R P
Sbjct: 102 CILHSPRHVGARHRRLRPPSSTSHVGASCRWP 133
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 68 TPMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWESAA 229
TP PP QH +A P+ +P+P E T E + + + E +AA
Sbjct: 368 TPPPPPQQQQHQPET-KAREPEPEPEPMEVTEEEKERKERKAAAQEEKEAGNAA 420
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 116 RADTPQDQPQPQEGTSPASEDEGVEGT--LVRKHEWESAAKRASNRSWDKVYVVAKDGR 286
+A + + QEG EDE EGT + R+ ++A +S+ DK K GR
Sbjct: 88 KATIQASEGETQEGQVSTEEDESPEGTKKIKRRGRKKAATTASSSEEKDKAKEPKKRGR 146
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/78 (23%), Positives = 30/78 (38%)
Frame = +2
Query: 68 TPMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWESAAKRASNR 247
+P P P H D A P P P + D+ VE E+E + +
Sbjct: 77 SPPPPHPAYMHPPPFDSAPPPAAAPPPSDPELQKRIDKVVEYIAKNGPEFEVVIRDKQHD 136
Query: 248 SWDKVYVVAKDGRMAFYK 301
+ D ++ +G A+Y+
Sbjct: 137 NPDYAFIFGGEGH-AYYR 153
>01_05_0283 -
20354065-20354154,20354579-20354890,20355566-20355763,
20356371-20356754,20357445-20357858,20359771-20360022
Length = 549
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 77 QPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWES 223
QP P Q + PQ QPQPQ +E E ++ + E+
Sbjct: 40 QPQPQPQSEPEPQQQPQPQPQPQPQPEAEAEAEAEAKAADVLARQVTET 88
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 77 QPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDE 181
+P P Q PQ QPQPQ P E E
Sbjct: 34 RPEPQQQPQPQPQSEPEPQQQPQPQPQPQPQPEAE 68
>09_04_0007 -
13641012-13641431,13642220-13642312,13642429-13642521,
13642607-13642671,13643495-13643565,13643644-13643682,
13644709-13645121
Length = 397
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 PPPVAQHSDAVDRADTPQDQPQPQEGTSPASE-DEGVEGTLVRKHEWESAAKRASNRSW 253
PPP ++ + A A+ +++ + +EG S A E D + + E A +S R +
Sbjct: 54 PPPASEMAAAAAAAEEEEEEEEEEEGWSKAVELDAAARREMAIRRLQEEAGTGSSRREF 112
>04_03_0053 -
10286076-10286516,10286560-10287586,10287756-10288096,
10288198-10288248
Length = 619
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 190 LNTFILAGGTCALLRLWLVLGCVGAVHRVTV 98
+ + + AGG LL+ WL LG + AV+R +V
Sbjct: 216 VGSIVGAGGPWWLLQTWLNLGAMKAVNRPSV 246
>03_06_0203 -
32337928-32338025,32338745-32338820,32338905-32338971,
32339181-32339275,32340062-32340151,32340293-32340340,
32340764-32341069
Length = 259
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 68 TPMQPPPVAQHSDAVDRADTPQDQPQPQEG 157
TP QPPP Q D R P D P+P G
Sbjct: 63 TPPQPPPQPQPGDRRRRPRLP-DPPRPHGG 91
>01_06_0787 -
31999632-32000045,32000128-32000214,32000295-32000584,
32000670-32000844,32000930-32001142,32001227-32001328,
32001418-32001822,32001922-32002134,32002312-32002357,
32002602-32002867,32003936-32004012,32004095-32004170,
32004339-32004418,32004945-32005036,32005132-32005171,
32005301-32005400,32005815-32005962,32006071-32006153,
32006207-32006383
Length = 1027
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 201 TNVPSTPSSSLAGLVPSCGCGWSWGVSARSTASLCCATGGGC 76
TNVP+ S+ ++ L G ++ R T+SLC TGG C
Sbjct: 756 TNVPTRDSTGVSTLA---GRRSVLKLAHRMTSSLCRTTGGSC 794
>01_03_0200 +
13744735-13745037,13745071-13745610,13745704-13745862,
13748992-13749123,13749282-13749472,13749541-13749792,
13750248-13750323,13750411-13750602,13750688-13750689,
13753230-13753287,13753736-13754941
Length = 1036
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTS 163
P +PP +H D+A+ P + P+P EG S
Sbjct: 295 PKKPPRPPKHKPLKDKAEEP-EIPKPTEGPS 324
>08_02_0880 +
22203440-22204324,22204763-22204876,22204964-22205455,
22205646-22205819,22206589-22206978,22209927-22210022,
22210645-22210760,22210872-22211042,22211126-22211285,
22211388-22211573,22211665-22211793,22211918-22211996,
22212159-22212268
Length = 1033
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 116 RADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWESAAKRA 238
RA TP + P P+E A E ++ L R S A+RA
Sbjct: 146 RAPTPSEPPPPREAAMAARERRRIQARLNRS---RSGARRA 183
>08_02_0676 - 19943638-19943895,19944296-19944632,19944711-19945063
Length = 315
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 89 VAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVR---KHEWESAAKRASNRSWDK 259
+A H DA D A P + S S E + T++ +HE E +AS+ SW
Sbjct: 154 IASHLDAHDDAVRLSRYGPPPDAASAMSMGEHRDDTVITIIVQHEVEGLEVQASDGSWHT 213
Query: 260 V 262
+
Sbjct: 214 I 214
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 26.6 bits (56), Expect = 6.0
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVD-RADTPQDQP----QPQEGTSPASED-EGVEGTLVRKHEWESAAK 232
P PPP +H DA R TP+ +P +PQ S A+E GT H A+
Sbjct: 164 PPPPPPAQRHKDADGVRVATPETRPPLGMRPQVTPSRAAEPLSSTGGTGTGDHVSAEKAQ 223
Query: 233 R 235
R
Sbjct: 224 R 224
>03_01_0050 +
430744-431337,432131-432249,432539-433084,433177-433483,
433605-433773,433861-433960,435805-436103,436796-436869,
437007-437442,437622-437650
Length = 890
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 209 HEWESAAKRASNRSWDKVYVVAKD 280
H W A R S WD ++V+ D
Sbjct: 510 HNWSQQAMRHSELDWDAIHVLRDD 533
>02_05_0849 +
32202610-32202880,32204234-32205711,32205993-32206143,
32206378-32206559
Length = 693
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 75 CSRRLWRSTVTRWTAPTHPKT 137
C WRSTVTRW P T
Sbjct: 655 CDDGDWRSTVTRWPLTGEPVT 675
>02_04_0243 +
21244743-21245837,21245921-21246148,21246240-21246458,
21246557-21247000,21247440-21247547,21247790-21247909
Length = 737
Score = 26.6 bits (56), Expect = 6.0
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +2
Query: 68 TPMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRK--HEWESAAKRAS 241
TP PP A + V R + Q Q T A ED V +V ES AK S
Sbjct: 15 TPQPPPAAAAAAAPVGRLQKTESQSLKQLITLTAKEDAAVVAPVVHAVITRAESNAKAKS 74
Query: 242 N 244
N
Sbjct: 75 N 75
>02_02_0586 -
11861509-11861637,11863651-11863815,11864738-11864846,
11864971-11865065,11865169-11865702,11866299-11866499,
11867826-11868090,11868111-11868736
Length = 707
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 107 AVDRADTPQDQPQPQEGTSPASEDEGVEG 193
AVD +TP PQP +P EDE V+G
Sbjct: 118 AVDEEETPAPAPQP----APRREDELVDG 142
>01_06_1671 -
39018929-39019027,39019310-39019439,39019529-39019637,
39020183-39020216,39020376-39021151,39021328-39021464,
39021732-39021876,39021958-39022341,39022435-39023210,
39023609-39023658,39024213-39024262,39024361-39024455,
39024539-39024797,39024943-39024982
Length = 1027
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/63 (25%), Positives = 24/63 (38%)
Frame = +2
Query: 92 AQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWESAAKRASNRSWDKVYVV 271
A H +A D ADT D + EGV L + + ++A+ D V
Sbjct: 714 AMHPEATDAADTRTDFDSHMPSDKQVNNVEGVTEQLTDNEKETAVVEKATTNMGDSAQVD 773
Query: 272 AKD 280
+ D
Sbjct: 774 SLD 776
>01_02_0007 + 10132380-10133201
Length = 273
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 77 QPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDE 181
QP P+ Q + PQ QPQPQ P + +
Sbjct: 57 QPQPLPQPNPNPQPQPLPQPQPQPQPQPQPLPQPQ 91
>01_01_0575 -
4271910-4272371,4272923-4272928,4272999-4273174,
4274150-4275299
Length = 597
Score = 26.6 bits (56), Expect = 6.0
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +2
Query: 74 MQPPPVAQHSDAVDRADTPQDQPQPQEGTSP-----ASEDEGVEGTLVRKHEWESAAKRA 238
M P+ +++ A ++ + D+ + +E P ASE+E + ++ E ++
Sbjct: 232 MTEAPLVENATATEKKEEHVDEEEEEEEEDPEEMVPASEEEADAEEVEKEEEDPEEVEKE 291
Query: 239 SNRSWDKVYVVAKDGRMAFYKDQKAYNASPDQYWRGE 349
+ KV AK G + K ++ AS + GE
Sbjct: 292 GGEAEAKVANAAKTGEVEKRKVEEDKKASGREVKEGE 328
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHEWESAA 229
P PP+ +DA D P P PQ+ + E+E E R+ E E+ A
Sbjct: 28 PRSAPPMPSSADA----DAPSSPPPPQQEAAAEGEEE-EEKKQQREEEEEAPA 75
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3
Query: 196 CPLNTFILAGGTCAL 152
CP + F LAGGTCA+
Sbjct: 277 CPDDGFALAGGTCAV 291
>06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026
Length = 267
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 71 PMQPP-PVAQHSDAVDRADTPQDQPQPQEGTSPASEDEGVEGTLVRKHE 214
P++PP P + DA TP P P + + E+E L+ HE
Sbjct: 128 PLEPPRPPPREQDA-----TPPPPPPPPQEIEESEEEEQEPSPLIEPHE 171
>05_02_0058 - 6210627-6211334
Length = 235
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 243 LEARLAADSHSCLRTNVPSTPSSSLAGLVPSCGCGWS 133
L+A A + + V TPSSS A + G GW+
Sbjct: 120 LDAAAVARAFEMMSAEVEGTPSSSAAAVQGGGGGGWA 156
>03_04_0001 - 16208401-16208778
Length = 125
Score = 26.2 bits (55), Expect = 7.9
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 71 PMQPPPVAQHSDAVD--RADTPQDQPQPQEGTSPASEDEGVEG 193
P+ PPP +Q S AVD A +P D P TS A VEG
Sbjct: 69 PLPPPPSSQASLAVDPTAAASPTDPPVV---TSAAPAGGSVEG 108
>02_05_0075 -
25610386-25610508,25610529-25610583,25610801-25611240,
25612951-25613619,25614551-25615870
Length = 868
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 113 DRADTPQDQPQPQEGTSPASEDE 181
D + T Q QPQPQ+ T +S E
Sbjct: 317 DESHTQQAQPQPQQPTEESSNTE 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,348,583
Number of Sequences: 37544
Number of extensions: 198266
Number of successful extensions: 1134
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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