Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D12
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.65 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.6  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   3.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   4.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   6.0  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 158 TSPASEDEGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKD 304
           +SP SED+ VE   V K   ++     +N   D+ Y   K  R    KD
Sbjct: 606 SSPRSEDKEVEDMPVLKRVLQAPPLYDTNSLMDEAYKPHKKFRALRQKD 654


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = +2

Query: 89   VAQHSDAVDRADTPQDQPQPQEGTSPASEDE 181
            +  HS    +   PQ Q Q Q+   P  + +
Sbjct: 1492 IVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQ 1522



 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +3

Query: 96  STVTRWTAPTHPKTNHNRRRAQVPP 170
           +T T  T  T P T  N      PP
Sbjct: 667 TTTTTTTTTTTPNTTQNASATTPPP 691


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 137 GLGVCRRGPPRHCAAPQ 87
           G+  C +GP   C  PQ
Sbjct: 57  GIVQCAKGPDELCGGPQ 73


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 75  CSRRLWRSTVTRWTAPTHPKTNHN 146
           C R    ST+T   A T+   N+N
Sbjct: 219 CQRNSNNSTITAGNANTNASNNNN 242


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 150 CGCGW 136
           CGCGW
Sbjct: 579 CGCGW 583


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,462
Number of Sequences: 438
Number of extensions: 1671
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)