Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D10
(197 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 125 4e-30
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 125 4e-30
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 125 4e-30
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 84 1e-17
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 84 1e-17
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 55 6e-09
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 49 4e-07
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 46 4e-06
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 42 8e-05
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 38 7e-04
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 36 0.005
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 36 0.005
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.085
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 0.46
L09634-2|AAA27966.1| 504|Caenorhabditis elegans Proteasome regu... 28 1.1
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 28 1.1
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 1.4
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 26 4.2
Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical p... 25 5.6
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 25 5.6
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 25 5.6
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 25 5.6
EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein. 25 5.6
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 25 5.6
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL021493-2|CAA16393.1| 382|Caenorhabditis elegans Hypothetical ... 25 7.4
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 25 7.4
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 25 7.4
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 25 7.4
Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical pr... 25 9.8
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 25 9.8
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 25 9.8
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 25 9.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 25 9.8
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 25 9.8
AF016416-7|AAB65272.2| 307|Caenorhabditis elegans Hypothetical ... 25 9.8
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 97
Query: 191 TI 196
TI
Sbjct: 98 TI 99
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 173
Query: 191 TI 196
TI
Sbjct: 174 TI 175
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 249
Query: 191 TI 196
TI
Sbjct: 250 TI 251
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 325
Query: 191 TI 196
TI
Sbjct: 326 TI 327
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 477
Query: 191 TI 196
TI
Sbjct: 478 TI 479
Score = 123 bits (296), Expect = 2e-29
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL GKTITLEVE SD
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASD 401
Query: 191 TI 196
TI
Sbjct: 402 TI 403
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPSDTI 196
MQIFVKTLTGKTITLEVE SDTI
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTI 23
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 11 PDQQRLIFAG 40
PDQQRLIFAG
Sbjct: 494 PDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 97
Query: 191 TI 196
TI
Sbjct: 98 TI 99
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 173
Query: 191 TI 196
TI
Sbjct: 174 TI 175
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 249
Query: 191 TI 196
TI
Sbjct: 250 TI 251
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 325
Query: 191 TI 196
TI
Sbjct: 326 TI 327
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 477
Query: 191 TI 196
TI
Sbjct: 478 TI 479
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 553
Query: 191 TI 196
TI
Sbjct: 554 TI 555
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 570 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 629
Query: 191 TI 196
TI
Sbjct: 630 TI 631
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 646 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 705
Query: 191 TI 196
TI
Sbjct: 706 TI 707
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 722 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 781
Query: 191 TI 196
TI
Sbjct: 782 TI 783
Score = 123 bits (296), Expect = 2e-29
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL GKTITLEVE SD
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASD 401
Query: 191 TI 196
TI
Sbjct: 402 TI 403
Score = 83.8 bits (198), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 127
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 798 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPSDTI 196
MQIFVKTLTGKTITLEVE SDTI
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTI 23
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 97
Query: 191 TI 196
TI
Sbjct: 98 TI 99
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 173
Query: 191 TI 196
TI
Sbjct: 174 TI 175
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 249
Query: 191 TI 196
TI
Sbjct: 250 TI 251
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 325
Query: 191 TI 196
TI
Sbjct: 326 TI 327
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 401
Query: 191 TI 196
TI
Sbjct: 402 TI 403
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 477
Query: 191 TI 196
TI
Sbjct: 478 TI 479
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 553
Query: 191 TI 196
TI
Sbjct: 554 TI 555
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 570 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 629
Query: 191 TI 196
TI
Sbjct: 630 TI 631
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 646 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 705
Query: 191 TI 196
TI
Sbjct: 706 TI 707
Score = 125 bits (302), Expect = 4e-30
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 722 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 781
Query: 191 TI 196
TI
Sbjct: 782 TI 783
Score = 82.6 bits (195), Expect = 3e-17
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 127
PDQQRLIFAGKQLEDGRTLSDYNIQK+STLHLVLRLRGG
Sbjct: 798 PDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGG 836
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPSDTI 196
MQIFVKTLTGKTITLEVE SDTI
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTI 23
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 130
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPSDTI 196
MQIFVKTLTGKTITLEVE SDTI
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTI 23
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 130
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPSDTI 196
MQIFVKTLTGKTITLEVE SDTI
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTI 23
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 55.2 bits (127), Expect = 6e-09
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 127
P QQRLIFAGKQ+ D +T +DY + S LHLVL LRGG
Sbjct: 38 PPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
Score = 32.3 bits (70), Expect = 0.049
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPSDTI 196
M I VKTLTGK I L++EP+D +
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRV 23
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 49.2 bits (112), Expect = 4e-07
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +2
Query: 50 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 196
+D RT+SDYNI+ STL L + ++ + + VKTL GKTI + ++ +DT+
Sbjct: 135 KDQRTISDYNIKNGSTLRLEVPVKEKLTVSVKTLFGKTIPISIKNTDTV 183
Score = 45.2 bits (102), Expect = 6e-06
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +2
Query: 11 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 121
PDQQRLIF QLE+ R L YNI+ E +HLV R R
Sbjct: 198 PDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLE 175
M + VKT TGKTIT+E
Sbjct: 59 MLLSVKTSTGKTITVE 74
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPSDTI 196
MQIFVKTLTGKTITLEVE SDTI
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTI 23
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 41.5 bits (93), Expect = 8e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 11 PDQQRLIFAGKQLE---DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 178
P+ Q+L+ L+ D TL D + + STL L + + + +FVKT TGKTIT+ +
Sbjct: 139 PNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 38.3 bits (85), Expect = 7e-04
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 2 HEAPDQQR-LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 115
H+ P L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 186 HDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 35.5 bits (78), Expect = 0.005
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 14 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 127
++QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 37 EEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 35.5 bits (78), Expect = 0.005
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 14 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 127
++QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 37 EEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.085
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 23 RLIFAGKQLEDGRTLSDYNIQKESTLHL 106
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 29.1 bits (62), Expect = 0.46
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 23 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 121
R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>L09634-2|AAA27966.1| 504|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 3 protein.
Length = 504
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 178 HLKGDSLASEGLHKYLHSTSQTKDQVEGRFFLNVIIRKSP--AIFKLLSSKNQSLLVRSL 5
HL D+ +EG+ KYLH T +V+ NV KSP + + +S +R L
Sbjct: 80 HLSSDAQFAEGMLKYLHYTPAADTEVQPMDTSNV-KTKSPKKGVKPVFASPESDCYLRLL 138
Query: 4 V 2
V
Sbjct: 139 V 139
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 112 KDQVEGRFFLNVIIRKSPAIFKLLSSKNQSLLV 14
K+ +GR+++ VII SP + + L + Q LL+
Sbjct: 447 KEHKDGRWWMEVIIMTSPLVIRRLLEQFQGLLL 479
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 26 LIFAGKQLEDGRTLSDYNIQKESTLHL 106
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 119 SDEGPSGG*ILSECYNQKESGH 54
SD G GG S CYN +E+GH
Sbjct: 24 SDGGRRGGGGGSTCYNCQETGH 45
>Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 148 GLHKYLHSTSQTKDQVEGRFFLNVIIRKS 62
G H +L QTK + RF L+V+ RKS
Sbjct: 572 GDHAHLFRGFQTKLKEHSRFVLDVLARKS 600
>Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 148 GLHKYLHSTSQTKDQVEGRFFLNVIIRKS 62
G H +L QTK + RF L+V+ RKS
Sbjct: 572 GDHAHLFRGFQTKLKEHSRFVLDVLARKS 600
>Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 148 GLHKYLHSTSQTKDQVEGRFFLNVIIRKS 62
G H +L QTK + RF L+V+ RKS
Sbjct: 572 GDHAHLFRGFQTKLKEHSRFVLDVLARKS 600
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 41 KQLEDGRTLSDYNIQKESTL 100
K LED TL+ YNI++ ST+
Sbjct: 209 KFLEDDHTLAHYNIREGSTI 228
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 2 HEAPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 133
+ APD + + G QL DG L +I+K + RGG++
Sbjct: 1465 YPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLK 1508
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 2 HEAPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 133
+ APD + + G QL DG L +I+K + RGG++
Sbjct: 1528 YPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLK 1571
>EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein.
Length = 715
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 148 GLHKYLHSTSQTKDQVEGRFFLNVIIRKS 62
G H +L QTK + RF L+V+ RKS
Sbjct: 572 GDHAHLFRGFQTKLKEHSRFVLDVLARKS 600
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 2 HEAPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 133
+ APD + + G QL DG L +I+K + RGG++
Sbjct: 1528 YPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLK 1571
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 82 SERIYPPLGPSSERWNANICEDPHW 156
+E Y P GPSS R++ P+W
Sbjct: 187 TETSYNPYGPSSGRYSRIPSSPPYW 211
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 82 SERIYPPLGPSSERWNANICEDPHW 156
+E Y P GPSS R++ P+W
Sbjct: 187 TETSYNPYGPSSGRYSRIPSSPPYW 211
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 82 SERIYPPLGPSSERWNANICEDPHW 156
+E Y P GPSS R++ P+W
Sbjct: 187 TETSYNPYGPSSGRYSRIPSSPPYW 211
>AL021493-2|CAA16393.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2B.2 protein.
Length = 382
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 44 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 190
Q + +T+ N K + LVL L +V +T + LE+ SD
Sbjct: 7 QSKISKTIPSQNFSKNLKIQLVLLLEHFQASYVLIITNFQLLLEISGSD 55
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 82 SERIYPPLGPSSERWNANICEDPHW 156
+E Y P GPSS R++ P+W
Sbjct: 187 TETSYNPYGPSSGRYSRIPSSPPYW 211
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 128 MQIFVKTLTGKTITLEVEPS 187
M + +KT TGKTIT+E S
Sbjct: 1 MLLSIKTSTGKTITVEAPKS 20
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 131 QIFVKTLTGKTITLEVEPSDTI 196
Q FV+ L GKT TL V SDT+
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTV 64
>Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 91 IYPPLGPSSERWNANICED 147
+Y P PS W+ NIC D
Sbjct: 360 VYYPSVPSEPGWSCNICFD 378
>Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 91 IYPPLGPSSERWNANICED 147
+Y P PS W+ NIC D
Sbjct: 360 VYYPSVPSEPGWSCNICFD 378
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 26 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 196
L F G G LSD + + R +G ++ K++ G + LE E ++ +
Sbjct: 409 LPFVGFSYTHGSLLSDARSLTDEIRAIAQRCQGDAELMEKSVDGFMVELENEKAELV 465
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +2
Query: 17 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 127
+Q+L+ G ++D + + YN+ + ++L ++ RGG
Sbjct: 616 KQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +2
Query: 17 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 127
+Q+L+ G ++D + + YN+ + ++L ++ RGG
Sbjct: 616 KQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 66 RVRPSSSCFPAKISLCWSGASC 1
+ +P SSC A +C +GA C
Sbjct: 476 KTQPLSSCEKANAYMCQNGAGC 497
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 100 PLGPSSERWNANICEDPHWQDYHP 171
PLGP R+N N W Y+P
Sbjct: 487 PLGPKDPRYNENERRYDVWNYYNP 510
>AF016416-7|AAB65272.2| 307|Caenorhabditis elegans Hypothetical
protein F29A7.2 protein.
Length = 307
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 181 LHLKGDSLASEGLHKYLHSTSQTKDQ-VEGRFFLNV 77
LHL L+SE L+ ++ S T DQ +E FL V
Sbjct: 214 LHLTDSKLSSEDLNIFIKSMINTPDQLLEDVQFLQV 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,688,005
Number of Sequences: 27780
Number of extensions: 78930
Number of successful extensions: 259
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 12,740,198
effective HSP length: 45
effective length of database: 11,490,098
effective search space used: 229801960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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