Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D08
(540 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 338 1e-93
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 338 1e-93
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 338 1e-93
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 338 1e-93
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 338 1e-93
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 338 1e-93
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 338 2e-93
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 338 2e-93
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 338 2e-93
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 332 1e-91
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 314 3e-86
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 178 2e-45
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 161 3e-40
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 9e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 83 2e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 57 9e-09
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 29 2.8
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 29 2.8
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 28 3.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 159/172 (92%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 337
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 159/172 (92%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 337
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 159/172 (92%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 337
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 338 bits (832), Expect = 1e-93
Identities = 159/172 (92%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 122 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 181
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMK
Sbjct: 182 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 241
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 242 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 293
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 338 bits (832), Expect = 1e-93
Identities = 159/172 (92%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 152 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 211
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMK
Sbjct: 212 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 271
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 272 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 323
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 159/172 (92%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 337
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 158/172 (91%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 337
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 158/172 (91%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 337
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 158/172 (91%), Positives = 167/172 (97%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 337
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 332 bits (815), Expect = 1e-91
Identities = 157/172 (91%), Positives = 166/172 (96%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 166 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMK
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CD+DIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAP T+KIKIIAPP ++
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERK 336
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 314 bits (771), Expect = 3e-86
Identities = 146/172 (84%), Positives = 159/172 (92%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
IYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDI EKLCYVA DFE
Sbjct: 165 IYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFE 224
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMK
Sbjct: 225 SELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMK 284
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
CDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPP ++
Sbjct: 285 CDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERK 336
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 178 bits (433), Expect = 2e-45
Identities = 79/156 (50%), Positives = 107/156 (68%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR + EKLCY+A D E
Sbjct: 169 VYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVE 228
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
QE A +T L + Y LPDG+VI +G ERF PE LFQP + +E G+ E ++ I
Sbjct: 229 QEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQA 288
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXL 477
D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 289 SDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQL 324
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 161 bits (391), Expect = 3e-40
Identities = 81/174 (46%), Positives = 110/174 (63%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
I +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++ E CY+ALD
Sbjct: 169 IVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-- 226
Query: 190 QEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK 369
T + S++ SY LPD I I N FR PE LF+P +G E G+ V SIMK
Sbjct: 227 ---PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMK 283
Query: 370 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKEVL 531
CDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I A + L
Sbjct: 284 CDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSL 337
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 101 bits (242), Expect = 3e-22
Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 6/175 (3%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDINEKLCYVAL 180
+ +GY + AI + + + D L L+ Y+F + E+ I+R E+ YV
Sbjct: 337 VIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPE 396
Query: 181 DFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMESCGIHETV 351
D+++E + T SL+ P Q I N RF C E LF+P G+++ G+H+ +
Sbjct: 397 DYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQLI 456
Query: 352 YNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPP 516
+ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI ++ P
Sbjct: 457 HEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISP 511
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.5 bits (222), Expect = 9e-20
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Frame = +1
Query: 10 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFE 189
+ +GY + I + +AGRD+T ++ +L +R ++ E+ + I EK CYV D
Sbjct: 187 VADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVM 246
Query: 190 QEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQPSFLGME-SCGIH 342
+E T K DG IT +G ERF PE F P F E + I
Sbjct: 247 KEFVKY--DTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPIS 304
Query: 343 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKI 498
+T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L+ +++
Sbjct: 305 DTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQM 356
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 22/184 (11%)
Frame = +1
Query: 19 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFEQEM 198
G + +++R+D+ G+ LT+ L ++ R + E ++ + E LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 199 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 312
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 313 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTI 492
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ + P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEY 340
Query: 493 KIKI 504
+ +
Sbjct: 341 GLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 22/184 (11%)
Frame = +1
Query: 19 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDINEKLCYVALDFEQEM 198
G + +++R+D+ G+ LT+ L ++ R + E ++ + E LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 199 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 312
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 313 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTI 492
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ + P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEY 340
Query: 493 KIKI 504
+ +
Sbjct: 341 GLNV 344
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Frame = +1
Query: 235 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 399
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 400 ANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPP 516
+N ++GG ++ G +R+ + P TIK+++ A P
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAP 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 349 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXL-APSTIKIKII 507
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVI 247
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -1
Query: 420 TRHDSVGVQVLTDVNVALHDRVVDGLVDAARFHTQE 313
T + V +Q TD++ L ++++DGL+ A + TQE
Sbjct: 889 TIENIVALQGATDIDARLEEQLIDGLLYAFQEQTQE 924
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -1
Query: 420 TRHDSVGVQVLTDVNVALHDRVVDGLVDAARFHTQE 313
T + V +Q TD++ L ++++DGL+ A + TQE
Sbjct: 889 TIENIVALQGATDIDARLEEQLIDGLLYAFQEQTQE 924
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 138 FPLSGGGERVAPLSEDLHEVVGQVASSQVQTEDGVGQGVTFVDA 7
F L+GG + DL + G++ ++V E G+ Q + F+D+
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDS 230
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 471 RPRSLHHQDQDHRSPPKGSTPYG 539
RPR L D ++SPP TP G
Sbjct: 722 RPRDLQDMDSTYQSPPPTQTPLG 744
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,839,865
Number of Sequences: 27780
Number of extensions: 232405
Number of successful extensions: 799
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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