Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D08
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             220   6e-60
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   8.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.1  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  220 bits (538), Expect = 6e-60
 Identities = 102/111 (91%), Positives = 108/111 (97%)
 Frame = +1

Query: 193 EMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC 372
           EMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 373 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPRKE 525
           DVDIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPP K+
Sbjct: 61  DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKK 111


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 156 IDVTYDFPLSGGGERVAPLSEDLHEVVGQVASSQVQTEDGVGQ-GVT 19
           +D+T     S  G+ V     +L+ +VG  A+  +  E+G G  GVT
Sbjct: 19  VDLTQCLQESSTGQSVEFSPMELNALVGTPAAPNMPAEEGEGMAGVT 65



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/38 (31%), Positives = 14/38 (36%)
 Frame = +3

Query: 423 YHHVPRYRRQDAEGDHRPRSLHHQDQDHRSPPKGSTPY 536
           YH  P          HR  S HHQ  +H   P    P+
Sbjct: 316 YH--PHQHHPSQYHPHRGSSPHHQHGNHTMGPTMGPPH 351


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 153 DVTYDFPLSGGGERVAPLSEDLHEV 79
           D++YDF + GGG   A ++  L EV
Sbjct: 66  DLSYDFIVVGGGAARAVVAGRLSEV 90


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 355 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKI 504
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI 390


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 474 PRSLHHQDQDHRSPP 518
           PRS+  Q  DH++ P
Sbjct: 389 PRSIFRQTDDHQNSP 403


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -2

Query: 323 IPKNEGWKRASGQRNLSLPMVIT*PSGSSYDFSREVEAAAVAI 195
           IP +      +G+RN+  P+V +    +++ +  +VE  A+ I
Sbjct: 170 IPHDIAINSTTGKRNVVTPIVQSFDYNNTWVYIADVEGYALII 212


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 272 TRGSVAPKLSSSPRSWVWN 328
           TRG + P   +    W WN
Sbjct: 351 TRGFLQPVCQNEMNKWWWN 369


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,639
Number of Sequences: 438
Number of extensions: 2819
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)