Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D07
(368 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0088 + 684471-685154,685271-685834,685938-686222 71 4e-13
07_01_0087 + 676501-677907 70 5e-13
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709... 69 2e-12
12_01_0556 - 4514686-4514868,4515168-4515290,4515381-4515617,451... 65 1e-11
06_03_0298 - 19272257-19273714 65 1e-11
01_04_0011 + 15067536-15068236,15068283-15068898 65 1e-11
11_01_0667 + 5436764-5437384,5437684-5437923,5438037-5438159,543... 64 3e-11
11_01_0665 - 5413561-5413593,5413785-5413907,5414020-5414259,541... 64 4e-11
04_01_0158 - 1801724-1801951,1802047-1803078 64 4e-11
07_01_0085 + 663694-665022 63 8e-11
07_01_0086 + 672173-673603 62 1e-10
02_02_0404 + 9876703-9877314,9877599-9877838,9877951-9878073,987... 62 1e-10
01_01_0875 + 6856440-6857195,6858670-6858918,6859025-6859147,685... 60 7e-10
05_06_0158 - 26054487-26054672,26054770-26055018,26056003-260566... 57 4e-09
01_01_1192 + 9511961-9512977,9513860-9514078 57 4e-09
01_06_0606 + 30554734-30555480,30556508-30556756,30556889-305570... 57 5e-09
01_06_0051 + 25988439-25989068,25989445-25989693,25989952-259900... 57 5e-09
01_01_1191 + 9487835-9488467,9492584-9492787 56 7e-09
10_08_0879 - 21255033-21255236,21255292-21255465,21255558-212556... 55 2e-08
07_03_0162 - 14565165-14565350,14565757-14566131,14566287-14566922 53 6e-08
03_01_0432 + 3339235-3339915,3340313-3340561,3341071-3341139,334... 53 8e-08
09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305 51 3e-07
09_06_0185 - 21422946-21423671,21423746-21423924,21424004-214242... 49 1e-06
12_02_0508 + 19820288-19821031,19822612-19822860,19823166-198232... 44 3e-05
04_01_0624 - 8202783-8203140,8203242-8203594,8203697-8203872,820... 42 2e-04
04_01_0625 - 8222105-8222462,8222574-8222926,8223029-8223204,822... 40 6e-04
09_06_0182 - 21397221-21397575,21397712-21398076,21398510-213986... 38 0.002
06_01_0717 - 5219848-5220178,5220268-5220617,5221807-5221982,522... 38 0.002
01_03_0265 - 14425596-14425739,14427419-14427775 34 0.040
03_01_0580 + 4293079-4293582,4293797-4294037,4294982-4295160,429... 33 0.070
02_01_0383 + 2776526-2776632,2777579-2777835,2777915-2778366,277... 28 2.0
04_01_0261 + 3516461-3516629,3517729-3517823,3518724-3518834,351... 28 2.6
06_01_0149 + 1124427-1126805 27 3.5
02_04_0309 - 21924042-21925580 27 3.5
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 27 6.1
08_01_0015 - 103399-104001 26 8.1
>07_01_0088 + 684471-685154,685271-685834,685938-686222
Length = 510
Score = 70.5 bits (165), Expect = 4e-13
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +3
Query: 45 EHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLV 224
E TG + EE ++ V+V GH+S+P++P I G + +HSH YR P+P+ + V++
Sbjct: 174 ERDDTGVQ-EEVFDAVVVATGHYSQPSVPTIKGMEAWRRRQLHSHSYRLPEPFRDEVVVM 232
Query: 225 IGAGPSGMDIGLDVAELSK 281
+G G SG DI LD+ ++K
Sbjct: 233 VGCGDSGKDIALDLISVAK 251
>07_01_0087 + 676501-677907
Length = 468
Score = 70.1 bits (164), Expect = 5e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTN 209
W V+ +H + EE ++ V+V +GHF +P LP I G + + +HSH YR PD +
Sbjct: 147 WAVRSKHHGEAET-EEVFDAVVVASGHFCQPRLPTIDGMDRWRRRQLHSHSYRVPDAFHG 205
Query: 210 RRVLVIGAGPSGMDIGLDVAELSK 281
V+++G G S DIGL++ ++K
Sbjct: 206 EVVVIVGCGISSKDIGLELRRVAK 229
>02_04_0363 +
22369461-22370127,22370240-22370310,22370412-22370978,
22371056-22371301
Length = 516
Score = 68.5 bits (160), Expect = 2e-12
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 9 VRRVD-NVWK-VKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHD 182
VR +D +WK + EE ++ V+V GH+S+P LP+I G ++ +HSH
Sbjct: 177 VRSMDAGLWKRCTDDQMAEAHCVEEVFDAVVVATGHYSQPKLPSIQGMGDWKRRQMHSHW 236
Query: 183 YREPDPYTNRRVLVIGAGPSGMDIGLDVAELSK 281
YR PD + + V+++G G SGMDI LD+ +++
Sbjct: 237 YRVPDSFRDEVVVLVGCGDSGMDIALDLLAVAR 269
>12_01_0556 -
4514686-4514868,4515168-4515290,4515381-4515617,
4515747-4516358
Length = 384
Score = 65.3 bits (152), Expect = 1e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +3
Query: 18 VDNVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPD 197
V W V G + +++V +G S N+P+IPG F G +IHS +R D
Sbjct: 108 VQKYWVVTTHDQVNGMVSKYAARFLVVASGENSAGNIPSIPGLEDFSGHVIHSSSFRSAD 167
Query: 198 PYTNRRVLVIGAGPSGMDIGLDVA 269
Y +RVLV+G G SGM+I D++
Sbjct: 168 SYAAQRVLVVGCGNSGMEIAYDLS 191
>06_03_0298 - 19272257-19273714
Length = 485
Score = 65.3 bits (152), Expect = 1e-11
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Frame = +3
Query: 3 TRVRRVD---NVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIH 173
TRV RV + W V+ + + EE ++ V+V G +++P LP+I G + G +H
Sbjct: 125 TRVLRVAADRDGWAVRSRRGEV--ETEEVFDAVVVAVGSYTQPRLPSIDGMEAWPGRQLH 182
Query: 174 SHDYREPDPYTNRRVLVIGAGPSGMDIGLDVAELSK 281
SH YR PD + V+V+G G SG DI L++ +++
Sbjct: 183 SHSYRVPDSFRGEVVVVVGCGFSGKDIALELRRVAR 218
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 65.3 bits (152), Expect = 1e-11
Identities = 31/103 (30%), Positives = 57/103 (55%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTN 209
W V+ +H + EE ++ V+V G +S+P LP+I G + + +HSH YR PD +
Sbjct: 129 WTVRSKHNGDAET-EEVFDAVVVATGQYSQPRLPSIDGMDKWRRRQLHSHSYRVPDSFAG 187
Query: 210 RRVLVIGAGPSGMDIGLDVAELSKTLVHSHHSKVNFRTAFPPN 338
V+++G SG ++ L++ ++K + H S + + A P+
Sbjct: 188 EVVVIVGCNLSGKEVALELLRVAKEV---HLSSKSTKEAMTPS 227
>11_01_0667 +
5436764-5437384,5437684-5437923,5438037-5438159,
5438301-5438480
Length = 387
Score = 64.1 bits (149), Expect = 3e-11
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +3
Query: 24 NVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPY 203
N W V T ++++V G S N+P IPG + FEG IHS Y+ Y
Sbjct: 113 NQWVVLVRDMDTSVVARLATQFLVVAAGENSAANIPPIPGLSRFEGEAIHSSAYKSGRAY 172
Query: 204 TNRRVLVIGAGPSGMDIGLDVA 269
T + VLV+GAG SGM+I D+A
Sbjct: 173 TGKSVLVVGAGNSGMEIAYDLA 194
>11_01_0665 -
5413561-5413593,5413785-5413907,5414020-5414259,
5414564-5415184
Length = 338
Score = 63.7 bits (148), Expect = 4e-11
Identities = 31/82 (37%), Positives = 43/82 (52%)
Frame = +3
Query: 24 NVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPY 203
N W V T ++++V G S ++P +PG FEG IHS Y+ Y
Sbjct: 113 NRWAVLARDTDTSVVTRLTAQFLVVATGENSAASIPPVPGLTRFEGEAIHSSAYKSGRAY 172
Query: 204 TNRRVLVIGAGPSGMDIGLDVA 269
T + VLV+GAG SGM+I D+A
Sbjct: 173 TGKNVLVVGAGNSGMEIAYDLA 194
>04_01_0158 - 1801724-1801951,1802047-1803078
Length = 419
Score = 63.7 bits (148), Expect = 4e-11
Identities = 28/89 (31%), Positives = 51/89 (57%)
Frame = +3
Query: 6 RVRRVDNVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDY 185
R +W+V+ + G + E +++V G ++ +P+IPG + F G ++H DY
Sbjct: 121 RYDETSGLWRVRAS-SSAGAEMEYIGSWLVVATGENAESVVPDIPGIDGFGGEVVHVADY 179
Query: 186 REPDPYTNRRVLVIGAGPSGMDIGLDVAE 272
+ + Y +RVLV+G G SGM++ LD+ +
Sbjct: 180 KSGEAYRGKRVLVVGCGNSGMEVSLDLCD 208
>07_01_0085 + 663694-665022
Length = 442
Score = 62.9 bits (146), Expect = 8e-11
Identities = 28/81 (34%), Positives = 48/81 (59%)
Frame = +3
Query: 39 KHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRV 218
+H A+T EE ++ V+V GH+S+P LP I G + + +HSH YR PD + V
Sbjct: 135 RHGEAET----EEVFDAVVVAIGHYSQPRLPTIDGMDRWRRKQLHSHSYRVPDSFAGEVV 190
Query: 219 LVIGAGPSGMDIGLDVAELSK 281
+++G SG ++ L++ ++K
Sbjct: 191 VIVGCSVSGAELALELRRVAK 211
>07_01_0086 + 672173-673603
Length = 476
Score = 62.5 bits (145), Expect = 1e-10
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +3
Query: 39 KHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRV 218
+H A+T EE ++ V+V GH+S+P LP + G + + +HSH YR PD + V
Sbjct: 158 RHGEAET----EEVFDAVVVAIGHYSQPRLPTVDGMDRWRRKQLHSHSYRVPDSFAGEVV 213
Query: 219 LVIGAGPSGMDIGLDVAELSK 281
+++G SG ++ L++ ++K
Sbjct: 214 VIVGCSVSGAELALELRRVAK 234
>02_02_0404 +
9876703-9877314,9877599-9877838,9877951-9878073,
9878195-9878374
Length = 384
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTN 209
W V + TG ++I+ G S ++P +PG FEG IHS Y+ + YT
Sbjct: 112 WAVLAQDTDTGVVARLTARFLIMATGEKSAASIPLVPGLAGFEGEAIHSSAYKSGNGYTG 171
Query: 210 RRVLVIGAGPSGMDIGLDVA 269
+ VLV+GAG SGM+I D+A
Sbjct: 172 KSVLVVGAGNSGMEIAYDLA 191
>01_01_0875 +
6856440-6857195,6858670-6858918,6859025-6859147,
6859288-6859479
Length = 439
Score = 59.7 bits (138), Expect = 7e-10
Identities = 23/60 (38%), Positives = 40/60 (66%)
Frame = +3
Query: 87 YVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGMDIGLDV 266
+++V G ++P +P + G F+G ++HS +YR D Y ++VLV+G G SGM++ LD+
Sbjct: 179 WLVVATGENAEPVVPEMDGAGRFKGQMMHSSEYRNGDGYAGKKVLVVGCGNSGMEVSLDL 238
>05_06_0158 -
26054487-26054672,26054770-26055018,26056003-26056611,
26056970-26056972
Length = 348
Score = 57.2 bits (132), Expect = 4e-09
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +3
Query: 27 VWKVKHEHAQTGQKFEEDYEYV----IVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREP 194
+W+V+ A TG E+D EYV +V G S+ LP I G F G++IH+ Y+
Sbjct: 113 LWRVRTTQA-TGM-MEDDVEYVSQWLVVATGENSEAVLPVIDGLEEFRGSVIHTSAYKSG 170
Query: 195 DPYTNRRVLVIGAGPSGMDIGLDV 266
+ + VLV+G G SGM++ LD+
Sbjct: 171 SKFAGKTVLVVGCGNSGMEVCLDL 194
>01_01_1192 + 9511961-9512977,9513860-9514078
Length = 411
Score = 57.2 bits (132), Expect = 4e-09
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTN 209
W V+ TG+ +++ G + +P +PG + F G ++HS DYR +
Sbjct: 125 WLVEAVDLATGKAERYAARHLVAAAGENDERVVPEVPGMDTFPGKVVHSADYRSAGAFKG 184
Query: 210 RRVLVIGAGPSGMDIGLDVA 269
R VLV+G G SG +I D+A
Sbjct: 185 RSVLVVGCGNSGFEIAYDLA 204
>01_06_0606 +
30554734-30555480,30556508-30556756,30556889-30557011,
30557187-30557384
Length = 438
Score = 56.8 bits (131), Expect = 5e-09
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 27 VWKVKHEHAQT-GQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPY 203
+W+V+ G++ E +++V G ++ LP I G + F+GT++H+ Y+ +
Sbjct: 159 LWRVRTRATGIMGEEVEYVSRWLVVATGENAEVVLPEIDGLDDFKGTVMHTSSYKSGGAF 218
Query: 204 TNRRVLVIGAGPSGMDIGLDV 266
+RVLV+G+G SGM++ LD+
Sbjct: 219 AGKRVLVVGSGNSGMEVCLDL 239
>01_06_0051 +
25988439-25989068,25989445-25989693,25989952-25990074,
25990246-25990464
Length = 406
Score = 56.8 bits (131), Expect = 5e-09
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +3
Query: 87 YVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGMDIGLDV 266
+++V G ++P +P+ PG F G +H+ +Y+ + + ++VLV+G G SGM++ LD+
Sbjct: 137 WLVVATGENAEPRVPDFPGMQKFAGCAMHTSEYKSGEQFAGKKVLVVGCGNSGMEVSLDL 196
>01_01_1191 + 9487835-9488467,9492584-9492787
Length = 278
Score = 56.4 bits (130), Expect = 7e-09
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTN 209
W V TG+ +++ G + +P +PG F G ++H+ DYR + +
Sbjct: 119 WLVDAVDLATGRAERYAARHLVAAAGENDERVVPEVPGMETFPGKVVHAADYRSAEGFKG 178
Query: 210 RRVLVIGAGPSGMDIGLDVA 269
+ VLV+G G SGM+I D+A
Sbjct: 179 KSVLVVGGGNSGMEIAYDLA 198
>10_08_0879 -
21255033-21255236,21255292-21255465,21255558-21255690,
21255769-21255854,21256593-21256742,21256804-21256904,
21257058-21257355
Length = 381
Score = 55.2 bits (127), Expect = 2e-08
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
Frame = +3
Query: 72 EEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPY----------TNRRVL 221
EE ++ V+V NGH + P +P + G ++G +HSH+YR P+P+ T V+
Sbjct: 77 EEVFDAVVVCNGHCTVPLVPKLRGIGNWQGKQMHSHNYRTPEPFQDQVQDAVSVTVSIVV 136
Query: 222 VIGAGPSGMDIGLDVAELSK 281
V+G G SG+DI +++ ++K
Sbjct: 137 VVGLGASGVDIAREISNVAK 156
>07_03_0162 - 14565165-14565350,14565757-14566131,14566287-14566922
Length = 398
Score = 53.2 bits (122), Expect = 6e-08
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +3
Query: 27 VWKVKHEHAQT---GQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPD 197
+W+V+ E G E +++V G ++ +P I G + FEG + H +Y+
Sbjct: 116 LWRVRAEDVSVDAAGDVTEYIGRWLVVATGENAERVVPEIDGADDFEGPVSHVAEYKSGA 175
Query: 198 PYTNRRVLVIGAGPSGMDIGLDV 266
Y +RVLV+G G SGM++ LD+
Sbjct: 176 AYRGKRVLVVGCGNSGMEVCLDL 198
>03_01_0432 +
3339235-3339915,3340313-3340561,3341071-3341139,
3341292-3341414,3341526-3341738
Length = 444
Score = 52.8 bits (121), Expect = 8e-08
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +3
Query: 87 YVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGMDIGLDV 266
+++V +G ++ +P + G F G +HS +YR + + RVLV+G G SGM++ LD+
Sbjct: 154 WLVVASGENAEVVVPKVKGRERFAGEALHSSEYRSGERFRGMRVLVVGCGNSGMEMCLDL 213
Query: 267 AE 272
E
Sbjct: 214 CE 215
>09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305
Length = 344
Score = 50.8 bits (116), Expect = 3e-07
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Frame = +3
Query: 21 DNVWKVKHEHAQTG--QKFEEDYEYVIVGNGHFSKPNLPNIP---GENLFEGTIIHSHDY 185
D VW++ + + G + F D+ V +G H PN+P P G LF+G I+HS DY
Sbjct: 133 DGVWRLTVKDLKIGNIEVFLVDFLIVCIGR-HSGSPNIPEFPANSGLELFKGKILHSIDY 191
Query: 186 REPDP----YTNRRVLVIGAGPSGMDIGLDVAE 272
D ++V +IG+G S DI +VA+
Sbjct: 192 SYMDNAAEFVKGKKVTIIGSGKSAFDIAAEVAK 224
>09_06_0185 -
21422946-21423671,21423746-21423924,21424004-21424241,
21424319-21424759
Length = 527
Score = 48.8 bits (111), Expect = 1e-06
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Frame = +3
Query: 36 VKHEHAQTGQKFEEDYEYVIVGNGHFSK-PNLPNIP---GENLFEGTIIHSHDYREPDP- 200
V H+ T Q +E ++++I+ G FS PN+P P G ++F G +IHS ++ + D
Sbjct: 138 VHHDDTDTTQVYE--FDFLILCIGRFSGVPNIPAFPPAGGPDVFRGRVIHSMEFSDMDDA 195
Query: 201 -----YTNRRVLVIGAGPSGMDIGLDVAE 272
+RV+V+G+G S DI + AE
Sbjct: 196 DAAALVKGKRVVVVGSGKSAFDIAAECAE 224
>12_02_0508 +
19820288-19821031,19822612-19822860,19823166-19823288,
19826916-19827146
Length = 448
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +3
Query: 87 YVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGMDIGLDV 266
+++V G + P G + G ++H+ Y+ D + ++VLV+G G SGM++ LD+
Sbjct: 176 WLVVATGENAVAAWP-AEGVGAYRGAVMHTSSYKRGDEFAGKKVLVVGCGNSGMEVSLDL 234
>04_01_0624 -
8202783-8203140,8203242-8203594,8203697-8203872,
8203993-8204230,8208308-8208748
Length = 521
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Frame = +3
Query: 84 EYVIVGNGHFSK-PNLPNIP---GENLFEGTIIHSHDY------REPDPYTNRRVLVIGA 233
++VI+ G FS PN+P P G F+G +IHS DY + +RV ++G
Sbjct: 152 DFVILCIGRFSGVPNIPTFPPGKGPEAFDGQVIHSMDYSKMGTKNSKEMIKGKRVTIVGY 211
Query: 234 GPSGMDIGLDVAELSKT 284
S +DI + AE++ T
Sbjct: 212 LKSALDIAAECAEVNGT 228
>04_01_0625 -
8222105-8222462,8222574-8222926,8223029-8223204,
8223318-8223555,8226983-8227423
Length = 521
Score = 39.9 bits (89), Expect = 6e-04
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Frame = +3
Query: 84 EYVIVGNGHFSK-PNLPNIP---GENLFEGTIIHSHDYRE------PDPYTNRRVLVIGA 233
++VI+ G +S PN+P P G F+G +IHS DY + + +RV ++G
Sbjct: 152 DFVILCVGKYSGVPNIPTFPACKGPEAFDGQVIHSMDYSKMGTKNCKEMIKGKRVTIVGY 211
Query: 234 GPSGMDIGLDVAELSKT 284
S +DI + AE++ T
Sbjct: 212 LKSALDIAAECAEVNGT 228
>09_06_0182 -
21397221-21397575,21397712-21398076,21398510-21398685,
21398802-21399039,21399627-21400118
Length = 541
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Frame = +3
Query: 84 EYVIVGNGHFSK-PNLPNIP---GENLFEGTIIHSHDY------REPDPYTNRRVLVIGA 233
++V++ G FS PN+P P G F GT IHS DY + +RV V+G
Sbjct: 169 DFVVLCIGRFSGFPNMPRFPPDKGPEAFAGTAIHSMDYSNMGAAKAAQLVKGKRVAVVGY 228
Query: 234 GPSGMDIGLDVAELSKTLVHSHHSKVNFRT 323
S +DI + A+ + SH + RT
Sbjct: 229 QKSAVDIAAECADANGA---SHPCTIVLRT 255
>06_01_0717 -
5219848-5220178,5220268-5220617,5221807-5221982,
5222065-5222302,5224492-5224657,5224792-5225159,
5225261-5225436,5227742-5227976,5228242-5228493,
5228513-5228848
Length = 875
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +3
Query: 36 VKHEHAQTGQKFEEDYEYVIVGN-GHFSKPNLPNIPGENLFEGTIIHSHDYREPDP---- 200
V+H ++ Q ++ D+ + +G G S P P F G ++HS DY D
Sbjct: 187 VQHRESENLQTYKFDFVILCIGRYGVASVPTFPPKGVPEAFHGQVLHSMDYSSMDHTAAA 246
Query: 201 --YTNRRVLVIGAGPSGMDIGLDVAELS 278
++R+ V+G+G S D A+++
Sbjct: 247 ELIRDKRIAVVGSGKSAFDTVAQCADVN 274
Score = 32.7 bits (71), Expect = 0.093
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Frame = +3
Query: 84 EYVIVGNGHFS----KPNLPNIPGENLFEGTIIHSHDYRE------PDPYTNRRVLVIGA 233
+++I+ G FS P P G +F G ++HS DY + +RV V+G+
Sbjct: 516 DFLILCTGRFSGVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGS 575
Query: 234 GPSGMD 251
G S D
Sbjct: 576 GKSAFD 581
>01_03_0265 - 14425596-14425739,14427419-14427775
Length = 166
Score = 33.9 bits (74), Expect = 0.040
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 168 IHSHDYREPDPYTNRRVLVIGAGPSGMDIGLDVAELS 278
+H Y+ + Y ++VLV+G G SGM + LD+ + S
Sbjct: 1 MHVAVYKSGEAYRGKKVLVVGCGNSGMVVSLDLCDHS 37
>03_01_0580 +
4293079-4293582,4293797-4294037,4294982-4295160,
4295319-4295674,4295761-4296100
Length = 539
Score = 33.1 bits (72), Expect = 0.070
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Frame = +3
Query: 81 YEYVIVGNGHFSK----PNLPNIPGENLFEGTIIHSHDY------REPDPYTNRRVLVIG 230
+E+V++ G + P P G +F+G ++HS DY + ++V+V+G
Sbjct: 172 FEFVVMCTGKYGDVARMPVFPPGKGPEVFKGKVMHSLDYCKLNEQETVELMRGKKVVVVG 231
Query: 231 AGPSGMDIGLDVAELSK 281
S +D+ L+ AE ++
Sbjct: 232 YKKSAIDLALECAEANQ 248
>02_01_0383 +
2776526-2776632,2777579-2777835,2777915-2778366,
2778845-2779102
Length = 357
Score = 28.3 bits (60), Expect = 2.0
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 81 YEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGM---- 248
Y+Y+++ GH P E + E D + + ++ VL+IG GP+G+
Sbjct: 95 YDYLVIATGHALTS--PGSRSERIKE----FQRDKGKIE--SSESVLIIGGGPTGVELAG 146
Query: 249 DIGLDVAELSKTLVH 293
+I +D E TLVH
Sbjct: 147 EIAVDYPEKKVTLVH 161
>04_01_0261 +
3516461-3516629,3517729-3517823,3518724-3518834,
3519179-3519213,3519864-3519954,3520124-3520196,
3521127-3521257,3524325-3524720
Length = 366
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 3 TRVRRVDNVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTI 167
T R V+ V + +H+ + ++ + +I GNG + L ++PG+ GTI
Sbjct: 132 TMERIVEYVTMMTRDHSTSAKELKMTVSVLIKGNGPNTINGLDHLPGDITDSGTI 186
>06_01_0149 + 1124427-1126805
Length = 792
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 219 LVIGAGPSGMDIGLDVAELSKTL 287
+V+ AGP G ++ LDVAE + L
Sbjct: 243 MVVKAGPRGYELDLDVAETDEVL 265
>02_04_0309 - 21924042-21925580
Length = 512
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 75 EDYEYVIVGNGHFSKPNLPNIPGENLF-EGTIIHSHDYREPD 197
+DYEY+ G+G P LP F +++H+ ++R PD
Sbjct: 438 KDYEYIPFGSGRRLCPGLPLAERAVPFILASLLHAFEWRLPD 479
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 198 PYTNRRVLVIGAGPSGMDIGLDVAEL 275
P RV V+G+GPSG+ L + EL
Sbjct: 235 PRKKPRVAVVGSGPSGLFASLVLGEL 260
>08_01_0015 - 103399-104001
Length = 200
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 139 GIFGKLGLLKCPLPTITYS*SSSNFCPVCACS 44
G+ + G+ PLPT++++ +S+ CAC+
Sbjct: 11 GVRPRGGIRPFPLPTLSFNNNSNRSACACACA 42
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,679,656
Number of Sequences: 37544
Number of extensions: 230448
Number of successful extensions: 647
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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