Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D07
(368 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 85 2e-17
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 77 3e-15
Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical pr... 73 9e-14
AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin monoox... 73 9e-14
AL031633-22|CAB97238.1| 512|Caenorhabditis elegans Hypothetical... 68 2e-12
AJ582072-1|CAE46542.1| 512|Caenorhabditis elegans flavin monoox... 68 2e-12
AJ582073-1|CAE46543.1| 518|Caenorhabditis elegans flavin monoox... 67 3e-12
AC006663-1|AAF39901.1| 518|Caenorhabditis elegans Flavin-contai... 67 3e-12
Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical p... 62 2e-10
AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin monoox... 62 2e-10
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 60 5e-10
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 60 5e-10
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF077546-3|AAC26318.3| 347|Caenorhabditis elegans Hypothetical ... 27 3.2
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 27 4.2
U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z73971-5|CAA98255.1| 187|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 26 7.3
AF016420-8|AAB65305.1| 364|Caenorhabditis elegans Serpentine re... 26 7.3
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 84.6 bits (200), Expect = 2e-17
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +3
Query: 9 VRRVDNVWKVKHEHAQTGQKFEEDY-EYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDY 185
V R+D+ WKV H G +E + + V V NGH+ PN P E+ FEG+ IHSHDY
Sbjct: 108 VERIDDKWKVTTHH---GAGIDEHFFDIVFVCNGHYFAPNNPY--EESAFEGSFIHSHDY 162
Query: 186 REPDPYTNRRVLVIGAGPSGMDIGLDVAELSKTL 287
R Y ++ V+VIGAGPSG+DI L ++E +K +
Sbjct: 163 RHSKDYIDKEVIVIGAGPSGIDISLQLSETAKKI 196
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 77.4 bits (182), Expect = 3e-15
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 9 VRRVDNVWKVKHE-HAQTGQKFEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDY 185
V+R +++WKV E +++T +F Y+ V V NGHF +P P + F+G +IHSHDY
Sbjct: 108 VKRENDLWKVLIESNSETITRF---YDVVFVCNGHFFEPLNPY--QNSYFKGKLIHSHDY 162
Query: 186 REPDPYTNRRVLVIGAGPSGMDIGLDVAE 272
R + YT + V+++GAGPSG+DI L +A+
Sbjct: 163 RRAEHYTGKNVVIVGAGPSGIDITLQIAQ 191
>Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical
protein K08C7.5 protein.
Length = 529
Score = 72.5 bits (170), Expect = 9e-14
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +3
Query: 21 DNVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPN-IPGENLFEGTIIHSHDYREPD 197
D WKV ++ + + EE ++ V+V +GH + P+ P PG+N F+G I+HSHDY++
Sbjct: 122 DGTWKVIYQTPEE-KTLEEIFDGVLVCSGHHAIPHWPKPFPGQNEFKGRIVHSHDYKDHK 180
Query: 198 PYTNRRVLVIGAGPSGMDIGLDVAELSK 281
Y ++ V+V+G G SG+D+ ++ + ++K
Sbjct: 181 GYEDKVVVVVGIGNSGIDVAVEQSRIAK 208
>AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 529
Score = 72.5 bits (170), Expect = 9e-14
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +3
Query: 21 DNVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPN-IPGENLFEGTIIHSHDYREPD 197
D WKV ++ + + EE ++ V+V +GH + P+ P PG+N F+G I+HSHDY++
Sbjct: 122 DGTWKVIYQTPEE-KTLEEIFDGVLVCSGHHAIPHWPKPFPGQNEFKGRIVHSHDYKDHK 180
Query: 198 PYTNRRVLVIGAGPSGMDIGLDVAELSK 281
Y ++ V+V+G G SG+D+ ++ + ++K
Sbjct: 181 GYEDKVVVVVGIGNSGIDVAVEQSRIAK 208
>AL031633-22|CAB97238.1| 512|Caenorhabditis elegans Hypothetical
protein Y39A1A.19 protein.
Length = 512
Score = 68.1 bits (159), Expect = 2e-12
Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +3
Query: 18 VDNVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNI-PGENLFEGTIIHSHDYREP 194
V WKV++ +TG + ++ V++ +GH + P++P PG+ F+G I HSHDY++
Sbjct: 124 VTGKWKVRYSD-ETGAEKTRIFDGVMLCSGHHAIPHIPKPWPGQEKFKGRITHSHDYKDH 182
Query: 195 DPYTNRRVLVIGAGPSGMDIGLDVAELSK 281
Y ++ V+V+G G SG D+ ++++ +SK
Sbjct: 183 KGYEDKTVVVVGIGNSGGDLAVELSRISK 211
>AJ582072-1|CAE46542.1| 512|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 512
Score = 68.1 bits (159), Expect = 2e-12
Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +3
Query: 18 VDNVWKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNI-PGENLFEGTIIHSHDYREP 194
V WKV++ +TG + ++ V++ +GH + P++P PG+ F+G I HSHDY++
Sbjct: 124 VTGKWKVRYSD-ETGAEKTRIFDGVMLCSGHHAIPHIPKPWPGQEKFKGRITHSHDYKDH 182
Query: 195 DPYTNRRVLVIGAGPSGMDIGLDVAELSK 281
Y ++ V+V+G G SG D+ ++++ +SK
Sbjct: 183 KGYEDKTVVVVGIGNSGGDLAVELSRISK 211
>AJ582073-1|CAE46543.1| 518|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 518
Score = 67.3 bits (157), Expect = 3e-12
Identities = 29/85 (34%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNI-PGENLFEGTIIHSHDYREPDPYT 206
WKV++ ++G+ E+ ++ V++ +GH + P++P PG+ F+G IIHSHDY++ Y
Sbjct: 127 WKVRYTD-ESGKFHEKIFDGVMICSGHHAIPHIPEPWPGQEKFKGRIIHSHDYKDHKGYE 185
Query: 207 NRRVLVIGAGPSGMDIGLDVAELSK 281
++ ++V+G G SG D ++++ + K
Sbjct: 186 DKVIVVVGIGNSGGDCAVELSRIGK 210
>AC006663-1|AAF39901.1| 518|Caenorhabditis elegans
Flavin-containing monooxygenasefamily protein 5 protein.
Length = 518
Score = 67.3 bits (157), Expect = 3e-12
Identities = 29/85 (34%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPNI-PGENLFEGTIIHSHDYREPDPYT 206
WKV++ ++G+ E+ ++ V++ +GH + P++P PG+ F+G IIHSHDY++ Y
Sbjct: 127 WKVRYTD-ESGKFHEKIFDGVMICSGHHAIPHIPEPWPGQEKFKGRIIHSHDYKDHKGYE 185
Query: 207 NRRVLVIGAGPSGMDIGLDVAELSK 281
++ ++V+G G SG D ++++ + K
Sbjct: 186 DKVIVVVGIGNSGGDCAVELSRIGK 210
>Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical
protein F53F4.5 protein.
Length = 568
Score = 61.7 bits (143), Expect = 2e-10
Identities = 23/74 (31%), Positives = 48/74 (64%)
Frame = +3
Query: 75 EDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGMDI 254
E++E +I+ GH ++P+ P + + F+G ++H++DY Y + V ++G G S +DI
Sbjct: 129 EEFEKLILCTGHHAEPSYPELKNLDNFKGKVVHAYDYTNTSGYEGKDVFLLGIGNSALDI 188
Query: 255 GLDVAELSKTLVHS 296
+D+A+++K++ S
Sbjct: 189 AVDIAKIAKSVTIS 202
>AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 568
Score = 61.7 bits (143), Expect = 2e-10
Identities = 23/74 (31%), Positives = 48/74 (64%)
Frame = +3
Query: 75 EDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGMDI 254
E++E +I+ GH ++P+ P + + F+G ++H++DY Y + V ++G G S +DI
Sbjct: 129 EEFEKLILCTGHHAEPSYPELKNLDNFKGKVVHAYDYTNTSGYEGKDVFLLGIGNSALDI 188
Query: 255 GLDVAELSKTLVHS 296
+D+A+++K++ S
Sbjct: 189 AVDIAKIAKSVTIS 202
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 60.1 bits (139), Expect = 5e-10
Identities = 28/85 (32%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPN-IPGENLFEGTIIHSHDYREPDPYT 206
WKV + + G + ++ V++ +GH + PN P G++ F+G IIHSH Y++ Y
Sbjct: 127 WKVNYTDDK-GATHDAVFDGVMLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYE 185
Query: 207 NRRVLVIGAGPSGMDIGLDVAELSK 281
++ V+V+G G SG D+ ++++ ++K
Sbjct: 186 DKVVVVVGIGNSGGDVAVELSRIAK 210
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 60.1 bits (139), Expect = 5e-10
Identities = 28/85 (32%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 30 WKVKHEHAQTGQKFEEDYEYVIVGNGHFSKPNLPN-IPGENLFEGTIIHSHDYREPDPYT 206
WKV + + G + ++ V++ +GH + PN P G++ F+G IIHSH Y++ Y
Sbjct: 127 WKVNYTDDK-GATHDAVFDGVMLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYE 185
Query: 207 NRRVLVIGAGPSGMDIGLDVAELSK 281
++ V+V+G G SG D+ ++++ ++K
Sbjct: 186 DKVVVVVGIGNSGGDVAVELSRIAK 210
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 204 TNRRVLVIGAGPSGMDIGLDVAELSKTLV 290
T +R+ +IG+GPSG+ + ++ T+V
Sbjct: 1845 TGKRIAIIGSGPSGLGAAAQLVKVGHTVV 1873
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 204 TNRRVLVIGAGPSGMDIGLDVAELSKTLV 290
T +R+ +IG+GPSG+ + ++ T+V
Sbjct: 1845 TGKRIAIIGSGPSGLGAAAQLVKVGHTVV 1873
>AF077546-3|AAC26318.3| 347|Caenorhabditis elegans Hypothetical
protein T08E11.5 protein.
Length = 347
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 19 SITFGKSNTSTHKLDRNLRRTTNM*LWVMDTLVNPICQIFREKIFLK 159
S TF ++ +T KLD ++ RT + ++ TL+N + + +++ K
Sbjct: 216 SFTFSETLVTTEKLDFDIVRTAGILIFQWSTLIN-LFDLRHRRVYFK 261
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 64 CPVCACSCLTFQTLSTRLT 8
C VCA C ++QTL LT
Sbjct: 828 CDVCAFKCSSYQTLEAHLT 846
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 64 CPVCACSCLTFQTLSTRLT 8
C VCA C ++QTL LT
Sbjct: 828 CDVCAFKCSSYQTLEAHLT 846
>U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical
protein F45E12.1 protein.
Length = 246
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 264 VAELSKTLVHSHHSKVNFRTAFP 332
V +L +TL+HSHH V +T P
Sbjct: 61 VLDLDETLIHSHHDGVLRQTVKP 83
>Z73971-5|CAA98255.1| 187|Caenorhabditis elegans Hypothetical
protein C50H2.7 protein.
Length = 187
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 365 LIDVCFVDVIRWESCSEIHFRVVTVH 288
L+ CFV+ I E C E H + T H
Sbjct: 14 LLKACFVEQIPDEVCDEFHLKKDTEH 39
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 111 FSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGM 248
F P+ + L E + H R + RVLV+GAGP G+
Sbjct: 137 FKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIGV 182
>AF016420-8|AAB65305.1| 364|Caenorhabditis elegans Serpentine
receptor, class r protein5 protein.
Length = 364
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 94 LWVMDTLVNPICQIFREKIFL 156
LW++ + + IC EKIFL
Sbjct: 163 LWIVGVMAHAICSSINEKIFL 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,133,796
Number of Sequences: 27780
Number of extensions: 198661
Number of successful extensions: 583
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -