Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D07
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    24   0.50 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   2.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   2.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   2.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   2.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   2.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    20   8.1  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 264 VAELSKTLVHSHHSKVNFRTAFPPN 338
           V E+ K L+ SH+ ++ F T  P N
Sbjct: 249 VNEIEKRLLFSHNDRLGFLTFCPTN 273


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 68 FLSSLCVLVFDFPNVI 21
          FL+SLC+LV   PN +
Sbjct: 11 FLASLCLLVQAVPNKV 26


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 68 FLSSLCVLVFDFPNVI 21
          FL+SLC+LV   PN +
Sbjct: 11 FLASLCLLVQAVPNKV 26


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 127 KLGLLKCPLPTITYS*SSSNFCPVCACSCLTFQTLSTRL 11
           KL + KC    +  S   +N  P+C+   LTF   +++L
Sbjct: 126 KLAIDKCDRLWVLDSGLVNNTQPMCSPKLLTFDLTTSQL 164


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 127 KLGLLKCPLPTITYS*SSSNFCPVCACSCLTFQTLSTRL 11
           KL + KC    +  S   +N  P+C+   LTF   +++L
Sbjct: 126 KLAIDKCDRLWVLDSGLVNNTQPMCSPKLLTFDLTTSQL 164


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 127 KLGLLKCPLPTITYS*SSSNFCPVCACSCLTFQTLSTRL 11
           KL + KC    +  S   +N  P+C+   LTF   +++L
Sbjct: 126 KLAIDKCDRLWVLDSGLVNNTQPMCSPKLLTFDLTTSQL 164


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 13/71 (18%), Positives = 28/71 (39%)
 Frame = +3

Query: 69   FEEDYEYVIVGNGHFSKPNLPNIPGENLFEGTIIHSHDYREPDPYTNRRVLVIGAGPSGM 248
            +E D + V+V     +   + N+     +   I+  ++    DP     ++     PSG 
Sbjct: 920  WETDIDRVLVPGSQQNVAGVFNLRPATTYHLRIVAENEIGASDPSDTVTIITAEEAPSGP 979

Query: 249  DIGLDVAELSK 281
               + V +L +
Sbjct: 980  PTSIRVDDLDQ 990


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 70  NFCPVCACSCLTFQTLS 20
           +FC V ACS  T   +S
Sbjct: 152 SFCVVLACSTATVYVMS 168


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 101 THNYIFVVLLKFLSSLCVLVFDFP 30
           T N I   +L  +S LCVLVF  P
Sbjct: 237 TVNLILPTVL--ISFLCVLVFYLP 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,596
Number of Sequences: 438
Number of extensions: 2527
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)