Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D05
         (264 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011349-1|AAR96141.1| 1961|Drosophila melanogaster RH02355p pro...    27   3.6  
AE014297-4447|AAF56945.4| 1961|Drosophila melanogaster CG31037-P...    27   3.6  
X15707-2|CAA33738.1|  350|Drosophila melanogaster protein ( Dros...    26   6.3  
BT010279-1|AAQ23597.1|  729|Drosophila melanogaster RE05370p pro...    26   6.3  
AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA...    26   6.3  
AE014296-196|AAF47456.1|  729|Drosophila melanogaster CG9194-PA ...    26   6.3  

>BT011349-1|AAR96141.1| 1961|Drosophila melanogaster RH02355p
           protein.
          Length = 1961

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 108 GIILVYEKFETTAHSIPALSLVDR 37
           G+ L+   F+ T H +PAL+LVD+
Sbjct: 83  GVWLLVLCFDNTLHIVPALALVDK 106


>AE014297-4447|AAF56945.4| 1961|Drosophila melanogaster CG31037-PA
           protein.
          Length = 1961

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 108 GIILVYEKFETTAHSIPALSLVDR 37
           G+ L+   F+ T H +PAL+LVD+
Sbjct: 83  GVWLLVLCFDNTLHIVPALALVDK 106


>X15707-2|CAA33738.1|  350|Drosophila melanogaster protein (
           Drosophila melanogasterDNA sequence (isolate CBS) for
           18S rRNA  (3'end), 5.8SrRNA and 28S rRNA (5'end).  ).
          Length = 350

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 141 YKSRRIYMVVDGIILVYEKFETTAHS 64
           Y   R   V+DG ILV+E+F    H+
Sbjct: 20  YSQARYIPVIDGEILVWEEFAYVTHT 45


>BT010279-1|AAQ23597.1|  729|Drosophila melanogaster RE05370p
           protein.
          Length = 729

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 125 YIWW*TVLF*CTKNLKLPRIQFQRCHWSIGLTNARLRPPP 6
           +++W    + CT+  K PR    R        +AR +PPP
Sbjct: 195 FLYWRICCYVCTRTAKRPRNARSRQRSMRSQRHARSQPPP 234


>AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA
           protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 259 PKCFKNRIIRSTFRY 215
           P+CFKN I+R T+ +
Sbjct: 97  PRCFKNNILRITYEF 111


>AE014296-196|AAF47456.1|  729|Drosophila melanogaster CG9194-PA
           protein.
          Length = 729

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 125 YIWW*TVLF*CTKNLKLPRIQFQRCHWSIGLTNARLRPPP 6
           +++W    + CT+  K PR    R        +AR +PPP
Sbjct: 195 FLYWRICCYVCTRTAKRPRNARSRQRSMRSQRHARSQPPP 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,657,413
Number of Sequences: 53049
Number of extensions: 145644
Number of successful extensions: 333
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)