Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D05
         (264 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   2.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   3.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   4.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   4.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   7.8  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 50  HWSIGLTNARLRPPPR 3
           H+S G T+++L P PR
Sbjct: 371 HYSNGQTHSQLCPTPR 386


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 174 NY*TRLRF*HKYKSRRIYMVVDGIILVYE 88
           NY T  R    Y  R I   VDG  LVY+
Sbjct: 510 NYETMGRALRYYYQRGILAKVDGQRLVYQ 538


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 114 VDGIILVYEKFETTAHS 64
           VD +I  +E+F+TT ++
Sbjct: 456 VDKLITYFEQFDTTINN 472


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 114 VDGIILVYEKFETTAHS 64
           VD +I  +E+F+TT ++
Sbjct: 456 VDKLITYFEQFDTTINN 472


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 53  SAGIECAVVSNFSYTRIIP 109
           + G+E   V+N +YT ++P
Sbjct: 10  TTGLENWRVNNSNYTELLP 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,130
Number of Sequences: 438
Number of extensions: 1098
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)