Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D01
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   2.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   2.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    20   7.8  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    20   7.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    20   7.8  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/43 (20%), Positives = 23/43 (53%)
 Frame = -3

Query: 350 NRLLCAVIYSSVVINKSGPQIVLSADINDLTQSISHLPSFLIY 222
           N L+C  ++    + +    +++S  ++DL  ++  +P  L+Y
Sbjct: 59  NILVCVAVFLVRKLRRPCNYLLVSLAVSDLCVALLVMPMALLY 101


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 254 TASNHLCLRLIQFVDLTCLLPRLNISLHKVI 346
           T+  H  L+   FVD+T      ++  HKV+
Sbjct: 23  TSVFHQLLQTEAFVDVTLACNEASLKAHKVV 53


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 350 NRLLCAVIYSSVVINKSGPQIVLSADINDL 261
           N L+C  IY+   + + G   + S  I DL
Sbjct: 43  NILVCVAIYTDRGLRRIGNLFLASLAIADL 72


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 364 FLFKETDYFVQ 332
           FLFKE D F+Q
Sbjct: 169 FLFKEGDRFLQ 179


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 364 FLFKETDYFVQ 332
           FLFKE D F+Q
Sbjct: 185 FLFKEGDRFLQ 195


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,138
Number of Sequences: 438
Number of extensions: 1690
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)