Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_C24
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical pr... 153 6e-38
Z81108-7|CAB03240.1| 465|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z81106-4|CAB03224.1| 465|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical pr... 129 1e-30
U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical pr... 86 2e-17
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 82 3e-16
AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical ... 73 2e-13
Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical p... 44 5e-05
Z50070-10|CAD45592.1| 508|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z71185-9|CAA94910.2| 282|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 27 8.1
>Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical
protein C53A5.3 protein.
Length = 461
Score = 153 bits (372), Expect = 6e-38
Identities = 69/171 (40%), Positives = 103/171 (60%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPGFYPGTGGIDEIGSADGKGYSCNFPLNEG 188
VD+DVHHG+GV++ + + V T+SFHKY F+PGTG + +IG+ GK YS N PL +G
Sbjct: 177 VDIDVHHGDGVEEAFYTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDG 235
Query: 189 YTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKVILDK 368
T+ + FK + V F P A+++QCGAD L+ D G NLT G+ C +
Sbjct: 236 ITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSY 295
Query: 369 QKPTMLLGGGGYNHANTARLWTTLTAFVADVDLDDNIPEHNNWPQYGPSYK 521
P M++GGGGY N AR WT T+ D ++ + +P ++ + +GP+Y+
Sbjct: 296 NVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYR 346
>Z81108-7|CAB03240.1| 465|Caenorhabditis elegans Hypothetical
protein R06C1.1 protein.
Length = 465
Score = 145 bits (351), Expect = 2e-35
Identities = 63/171 (36%), Positives = 104/171 (60%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPGFYPGTGGIDEIGSADGKGYSCNFPLNEG 188
+D+DVHHG+GV++ + + V T+SFHK+ ++PGTG + ++G+ GK Y+ N PL +G
Sbjct: 172 IDIDVHHGDGVEEAFYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGSGKYYALNVPLRDG 230
Query: 189 YTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKVILDK 368
+ T F+ + V F+P+A+++QCGAD L+ D G NLT G+ C++ +
Sbjct: 231 VDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSF 290
Query: 369 QKPTMLLGGGGYNHANTARLWTTLTAFVADVDLDDNIPEHNNWPQYGPSYK 521
P +L+GGGGY N +R W TA + ++ D++P H+ + + P YK
Sbjct: 291 NVPLLLVGGGGYTIRNVSRCWLYETAIALNQEVSDDLPLHDYFDYFIPDYK 341
>Z81106-4|CAB03224.1| 465|Caenorhabditis elegans Hypothetical
protein R06C1.1 protein.
Length = 465
Score = 145 bits (351), Expect = 2e-35
Identities = 63/171 (36%), Positives = 104/171 (60%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPGFYPGTGGIDEIGSADGKGYSCNFPLNEG 188
+D+DVHHG+GV++ + + V T+SFHK+ ++PGTG + ++G+ GK Y+ N PL +G
Sbjct: 172 IDIDVHHGDGVEEAFYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGSGKYYALNVPLRDG 230
Query: 189 YTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKVILDK 368
+ T F+ + V F+P+A+++QCGAD L+ D G NLT G+ C++ +
Sbjct: 231 VDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSF 290
Query: 369 QKPTMLLGGGGYNHANTARLWTTLTAFVADVDLDDNIPEHNNWPQYGPSYK 521
P +L+GGGGY N +R W TA + ++ D++P H+ + + P YK
Sbjct: 291 NVPLLLVGGGGYTIRNVSRCWLYETAIALNQEVSDDLPLHDYFDYFIPDYK 341
>Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical
protein C08B11.2 protein.
Length = 507
Score = 129 bits (311), Expect = 1e-30
Identities = 60/166 (36%), Positives = 96/166 (57%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPGFYPGTGGIDEIGSADGKGYSCNFPLNEG 188
+D+D+HHG+GVQ+ ++ S V T+SFH++ ++PG+G I + G GK ++ N PL
Sbjct: 194 IDIDIHHGDGVQEAFNNSDRVMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFAINVPLMAA 252
Query: 189 YTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKVILDK 368
+E + F+ V + V F P+AI++QCG+D L D G L+ + ++ +K +
Sbjct: 253 IRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSL 312
Query: 369 QKPTMLLGGGGYNHANTARLWTTLTAFVADVDLDDNIPEHNNWPQY 506
KP M+LGGGGY N AR W T + + +DD IP + + Y
Sbjct: 313 GKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPGTSLYSHY 358
>U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical
protein F41H10.6a protein.
Length = 863
Score = 85.8 bits (203), Expect = 2e-17
Identities = 56/143 (39%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYP--GTGGIDEIGSADGKGYSCNFPL 179
VDLDVHHG+G Q + K V S H++E G F+P D IGS G GY+ N L
Sbjct: 179 VDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLAL 238
Query: 180 NE-GYTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKV 356
NE G T+ + V + F P +I+ G D L DP GG LT GYS L
Sbjct: 239 NETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYH 298
Query: 357 ILDKQKPTMLLG-GGGYNHANTA 422
+ + ML+ GGYNH +A
Sbjct: 299 LKSLAQGRMLVVLEGGYNHQISA 321
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYP--GTGGIDEIGSADGKGYSCNFPL 179
+D DVHHGNG Q+ + +V +S H+++ G FYP ++G G+G S N P
Sbjct: 595 LDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF 654
Query: 180 NEGYTNET-IVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYS 341
+ + AF++V + + F PD +++ G D DP G +T ++
Sbjct: 655 SGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFA 709
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical
protein F41H10.6c protein.
Length = 957
Score = 85.8 bits (203), Expect = 2e-17
Identities = 56/143 (39%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYP--GTGGIDEIGSADGKGYSCNFPL 179
VDLDVHHG+G Q + K V S H++E G F+P D IGS G GY+ N L
Sbjct: 181 VDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLAL 240
Query: 180 NE-GYTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKV 356
NE G T+ + V + F P +I+ G D L DP GG LT GYS L
Sbjct: 241 NETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYH 300
Query: 357 ILDKQKPTMLLG-GGGYNHANTA 422
+ + ML+ GGYNH +A
Sbjct: 301 LKSLAQGRMLVVLEGGYNHQISA 323
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYP--GTGGIDEIGSADGKGYSCNFPL 179
+D DVHHGNG Q+ + +V +S H+++ G FYP ++G G+G S N P
Sbjct: 597 LDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF 656
Query: 180 NEGYTNET-IVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYS 341
+ + AF++V + + F PD +++ G D DP G +T ++
Sbjct: 657 SGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFA 711
>U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical
protein F41H10.6b protein.
Length = 955
Score = 85.8 bits (203), Expect = 2e-17
Identities = 56/143 (39%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYP--GTGGIDEIGSADGKGYSCNFPL 179
VDLDVHHG+G Q + K V S H++E G F+P D IGS G GY+ N L
Sbjct: 179 VDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLAL 238
Query: 180 NE-GYTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKV 356
NE G T+ + V + F P +I+ G D L DP GG LT GYS L
Sbjct: 239 NETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYH 298
Query: 357 ILDKQKPTMLLG-GGGYNHANTA 422
+ + ML+ GGYNH +A
Sbjct: 299 LKSLAQGRMLVVLEGGYNHQISA 321
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYP--GTGGIDEIGSADGKGYSCNFPL 179
+D DVHHGNG Q+ + +V +S H+++ G FYP ++G G+G S N P
Sbjct: 595 LDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF 654
Query: 180 NEGYTNET-IVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYS 341
+ + AF++V + + F PD +++ G D DP G +T ++
Sbjct: 655 SGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFA 709
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 81.8 bits (193), Expect = 3e-16
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYPGTGGIDEIGSADGKGYSCNFPLN- 182
+D DVHHGNG Q + +V +S H+++ G F+PGTG + E+G D KG + N P +
Sbjct: 530 IDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVTEVGKNDAKGLTVNVPFSG 589
Query: 183 EGYTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPN--GGANLTASGYSSCLKV 356
+ + + A++ V V F PD IIV G D PN GG +T + K
Sbjct: 590 DVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKS 649
Query: 357 ILDKQKPTMLLG-GGGYN 407
+L+ ++L GGY+
Sbjct: 650 LLNYASGKVVLALEGGYD 667
>AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical
protein Y51H1A.5 protein.
Length = 517
Score = 72.5 bits (170), Expect = 2e-13
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Frame = +3
Query: 9 VDLDVHHGNGVQD--EYSLSKSVYTLSFHKYEPG-FYPGTGGIDEIGSADGKGYSCNFPL 179
VD DVH GNG Q+ E +V +S H+YE G F+P + + G + N PL
Sbjct: 170 VDYDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWPN---MPQTGIYHNYKNTINLPL 226
Query: 180 NE-GYTNETIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHDPNGGANLTASGYSSCLKV 356
N G T+ F + H F+PD ++V G D DP G +T +G+++ +++
Sbjct: 227 NTIGLTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRM 286
Query: 357 ILDKQKPTMLLGGGGY 404
++D P L GGY
Sbjct: 287 LIDTGIPVAALLEGGY 302
>Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical
protein F43G6.11b protein.
Length = 506
Score = 44.4 bits (100), Expect = 5e-05
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYPGTGGIDEIGSADGKGYSCNFPLNE 185
VD D H GNG ++ SFH + G F+P + D A + PLN
Sbjct: 168 VDFDYHAGNGTYQSVKDESRIHLTSFHGHHFGAFWPFSRDYD---YATNSPNTLFVPLNG 224
Query: 186 GYTNE-TIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHD--PNGGANLTASGYS--SCL 350
+E V F V + F+P+ I++ G D +D G + A+GY +CL
Sbjct: 225 TMNSEGDYVSVFHHVLLTMLEQFQPELILISAGFDSGYYDVMMEFGQGVKANGYGHMACL 284
Query: 351 KVILDKQKPTMLLGGG--GYNHANTARL 428
+ K +L GG YN+ +A +
Sbjct: 285 LNQICPGKILAILEGGYHPYNYTESASM 312
>Z50070-10|CAD45592.1| 508|Caenorhabditis elegans Hypothetical
protein F43G6.11a protein.
Length = 508
Score = 41.9 bits (94), Expect = 3e-04
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPG-FYPGTGGIDEIGSADGKGYSCNFPLNE 185
VD D H GNG ++ SFH + G F+P + D ++ + PLN
Sbjct: 168 VDFDYHAGNGTYQSVKDESRIHLTSFHGHHFGAFWPFSRDYDYATNSQNTLF---VPLNG 224
Query: 186 GYTNE-TIVYAFKKVFNAVYHYFKPDAIIVQCGADGLSHD--PNGGANLTASGYSSCLKV 356
+E V F V + F+P+ I++ G D +D G + A GY ++
Sbjct: 225 TMNSEGDYVSVFHHVLLPMLEQFQPELILISAGFDSGYYDVMMEFGQGVKAHGYGHMARL 284
Query: 357 I--LDKQKPTMLLGGG--GYNHANTARL 428
+ + K +L GG YN+ +A +
Sbjct: 285 LSQICPGKILAILEGGYHPYNYTESASM 312
>Z71185-9|CAA94910.2| 282|Caenorhabditis elegans Hypothetical
protein C35A5.9 protein.
Length = 282
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 9 VDLDVHHGNGVQDEYSLSKSVYTLSFHKYEPGFYP 113
VDLD H GNG +++ + +V+ F + P YP
Sbjct: 126 VDLDAHQGNGHARDFADNPNVFV--FDVFNPYVYP 158
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Frame = -1
Query: 338 VTTC-CQICSSIRIM**TICSTLY--YNSIWFKIMINSIEHLFKCIHNSFICVTFIQ--- 177
+T C C + S I I+ ++ ST + W K LF C+ + V F
Sbjct: 378 LTICICTMFSVITILALSVLSTFEDAFGENWSKCCRRFFLALFVCLFCFGLTVYFATNAG 437
Query: 176 ---WKIARITFAICTTYFINSTSAWVESWF 96
+++A + CT YFI + + +WF
Sbjct: 438 RHAYELATRSIKYCTIYFILTAELFATAWF 467
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,428,796
Number of Sequences: 27780
Number of extensions: 308123
Number of successful extensions: 846
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -