Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_C23
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   204   8e-53
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   204   8e-53
AF184230-1|AAD55741.1|  655|Drosophila melanogaster BcDNA.LD2812...    28   9.5  
AE014298-2834|AAF48949.1|  655|Drosophila melanogaster CG8062-PA...    28   9.5  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  204 bits (497), Expect = 8e-53
 Identities = 96/135 (71%), Positives = 105/135 (77%)
 Frame = +2

Query: 68  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 247
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 248 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 427
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 428 VAQDSSYKYFEVILI 472
           +AQD+SYKYFEVILI
Sbjct: 121 IAQDASYKYFEVILI 135



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +3

Query: 474 DPSHKAIRRDPKITWIVNAVHKH 542
           D  H AIRRDPKI WI   VHKH
Sbjct: 136 DTHHSAIRRDPKINWICKHVHKH 158


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  204 bits (497), Expect = 8e-53
 Identities = 96/135 (71%), Positives = 105/135 (77%)
 Frame = +2

Query: 68  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 247
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 248 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 427
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 428 VAQDSSYKYFEVILI 472
           +AQD+SYKYFEVILI
Sbjct: 121 IAQDASYKYFEVILI 135



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +3

Query: 474 DPSHKAIRRDPKITWIVNAVHKH 542
           D  H AIRRDPKI WI   VHKH
Sbjct: 136 DTHHSAIRRDPKINWICKHVHKH 158


>AF184230-1|AAD55741.1|  655|Drosophila melanogaster BcDNA.LD28120
           protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 370 NRLQVASGFQLVDTMALGFAVGSSLG 293
           NRL  ASG QL+      FA+G  LG
Sbjct: 585 NRLPAASGLQLIFNTIFSFAMGPILG 610


>AE014298-2834|AAF48949.1|  655|Drosophila melanogaster CG8062-PA
           protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 370 NRLQVASGFQLVDTMALGFAVGSSLG 293
           NRL  ASG QL+      FA+G  LG
Sbjct: 585 NRLPAASGLQLIFNTIFSFAMGPILG 610


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,624,463
Number of Sequences: 53049
Number of extensions: 470411
Number of successful extensions: 1063
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)