Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_C17
         (413 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35141-1|CAA84513.1|  467|Homo sapiens PAX7 paired box containin...    30   2.6  
X96744-2|CAA65522.1|  520|Homo sapiens PAX7 protein.                   30   2.6  
X96744-1|CAA65521.1|  518|Homo sapiens PAX7 protein.                   30   2.6  
X96743-1|CAA65520.1|  520|Homo sapiens paired box containing tra...    30   2.6  
DQ322591-1|ABC48797.1|  505|Homo sapiens PAX7 transcriptional fa...    30   2.6  
BC121166-1|AAI21167.1|  518|Homo sapiens paired box 7 protein.         30   2.6  
BC121165-1|AAI21166.1|  518|Homo sapiens paired box 7 protein.         30   2.6  
AL021528-1|CAA16432.1|  520|Homo sapiens paired box gene 7 protein.    30   2.6  
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr...    30   3.5  
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr...    30   3.5  
M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.                  29   4.6  
M22404-1|AAA36333.1|  167|Homo sapiens protein ( Human intestina...    29   4.6  
AY426594-1|AAR85526.1|  893|Homo sapiens PIAS-like protein protein.    29   8.1  
AK090415-1|BAC03396.1|  925|Homo sapiens FLJ00315 protein protein.     29   8.1  

>Z35141-1|CAA84513.1|  467|Homo sapiens PAX7 paired box containing
           transcription factor protein.
          Length = 467

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431

Query: 54  PGRSL 40
           PG SL
Sbjct: 432 PGDSL 436


>X96744-2|CAA65522.1|  520|Homo sapiens PAX7 protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431

Query: 54  PGRSL 40
           PG SL
Sbjct: 432 PGDSL 436


>X96744-1|CAA65521.1|  518|Homo sapiens PAX7 protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 371 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 429

Query: 54  PGRSL 40
           PG SL
Sbjct: 430 PGDSL 434


>X96743-1|CAA65520.1|  520|Homo sapiens paired box containing
           transcription factor protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431

Query: 54  PGRSL 40
           PG SL
Sbjct: 432 PGDSL 436


>DQ322591-1|ABC48797.1|  505|Homo sapiens PAX7 transcriptional
           factor isoform B protein.
          Length = 505

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431

Query: 54  PGRSL 40
           PG SL
Sbjct: 432 PGDSL 436


>BC121166-1|AAI21167.1|  518|Homo sapiens paired box 7 protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 371 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 429

Query: 54  PGRSL 40
           PG SL
Sbjct: 430 PGDSL 434


>BC121165-1|AAI21166.1|  518|Homo sapiens paired box 7 protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 371 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 429

Query: 54  PGRSL 40
           PG SL
Sbjct: 430 PGDSL 434


>AL021528-1|CAA16432.1|  520|Homo sapiens paired box gene 7 protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -3

Query: 213 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 55
           N  +PV NG    V+ + +G  S+ P     D  ++   GG DS  S+   C+ R   ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431

Query: 54  PGRSL 40
           PG SL
Sbjct: 432 PGDSL 436


>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
            protein.
          Length = 4262

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
 Frame = +2

Query: 53   GSTRCVRPVQSTSRLXXXXXXXXXXXXXG--VLLPAPISTPSTVESVPLPTGSLQLPVSD 226
            G+T    PV S +++             G  + + AP      + S+PL T  +  P + 
Sbjct: 2061 GNTLSTTPVDSKTQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIPLSTTPVASPEAS 2120

Query: 227  XXXXXXXXXXXXXXASDEITANRLPTE 307
                           S E++++ +PTE
Sbjct: 2121 TLSTTPVDSNSPVITSTEVSSSPIPTE 2147


>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
            protein.
          Length = 4493

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
 Frame = +2

Query: 53   GSTRCVRPVQSTSRLXXXXXXXXXXXXXG--VLLPAPISTPSTVESVPLPTGSLQLPVSD 226
            G+T    PV S +++             G  + + AP      + S+PL T  +  P + 
Sbjct: 2061 GNTLSTTPVDSKTQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIPLSTTPVASPEAS 2120

Query: 227  XXXXXXXXXXXXXXASDEITANRLPTE 307
                           S E++++ +PTE
Sbjct: 2121 TLSTTPVDSNSPVITSTEVSSSPIPTE 2147


>M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LLPAPISTPSTVESVPLPTGSLQLPVS 223
           L P PI+T +TV   P PTG+ Q P S
Sbjct: 117 LTPTPITTTTTVTPTPTPTGT-QTPTS 142


>M22404-1|AAA36333.1|  167|Homo sapiens protein ( Human intestinal
           mucin mRNA, partial cds, clone SMUC 40. ).
          Length = 167

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LLPAPISTPSTVESVPLPTGSLQLPVS 223
           L P PI+T +TV   P PTG+ Q P S
Sbjct: 26  LTPTPITTTTTVTPTPTPTGT-QTPTS 51


>AY426594-1|AAR85526.1|  893|Homo sapiens PIAS-like protein protein.
          Length = 893

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -3

Query: 198 VGNGTDSTVLGVDIGAGSSTPDGGLNEG--GGDSELSLDVDCTGRTHLVEPG 49
           VGN T S VLG  +G   S     +  G  GG S L+    C G+    E G
Sbjct: 48  VGNATQSQVLGNPMGPAGSPSGSSMMPGVAGGSSALT-SPQCLGQQAFAEGG 98


>AK090415-1|BAC03396.1|  925|Homo sapiens FLJ00315 protein protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -3

Query: 198 VGNGTDSTVLGVDIGAGSSTPDGGLNEG--GGDSELSLDVDCTGRTHLVEPG 49
           VGN T S VLG  +G   S     +  G  GG S L+    C G+    E G
Sbjct: 53  VGNATQSQVLGNPMGPAGSPSGSSMMPGVAGGSSALT-SPQCLGQQAFAEGG 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,775,561
Number of Sequences: 237096
Number of extensions: 967185
Number of successful extensions: 3026
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3024
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)