Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_C15
         (322 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   2.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   4.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   6.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   8.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   8.4  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 8   GCRCQIGDIIKSRQY 52
           GCRC  G ++KS  Y
Sbjct: 608 GCRCVKGILLKSGLY 622


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 257 FTSNKSDLCNTMRVPEHDTDLGRSKTL 177
           F + KS    TM +P H   L + KT+
Sbjct: 125 FKNAKSVTFQTMTIPNHYLWLYKDKTI 151


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 215 PEHDTDLGRSKTLFAKFE 162
           P H +DL     L  KFE
Sbjct: 175 PRHASDLDNCNHLMTKFE 192


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 137 G*FQPGRDTAAVRQRRLGYTLARCVHT 57
           G  +PG     +   R GY++AR   T
Sbjct: 386 GDIKPGSIIENIAHTRSGYSVARFAET 412


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 244 LLLVKRSCVS*KLWVLLLITGRF 312
           L ++  +C+  +LW +L   G F
Sbjct: 441 LYMLMEACLGGELWTVLRDKGHF 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,857
Number of Sequences: 438
Number of extensions: 2153
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)