Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_C14
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 32 0.17
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 32 0.17
AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical ... 30 0.69
U88182-1|AAB42309.1| 101|Caenorhabditis elegans Hypothetical pr... 30 0.91
AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein. 29 1.2
AF016660-3|AAN84803.1| 376|Caenorhabditis elegans Hypothetical ... 29 1.2
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 29 1.2
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 29 1.2
AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical ... 29 1.2
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z82069-5|CAB04906.2| 739|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 2.1
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 2.1
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 29 2.1
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 29 2.1
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 2.1
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 2.1
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 2.1
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 2.1
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 2.1
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 29 2.1
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 2.8
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 28 2.8
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 2.8
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 2.8
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 2.8
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 28 2.8
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 28 3.7
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 28 3.7
DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian str... 28 3.7
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 28 3.7
AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical ... 28 3.7
AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical ... 28 3.7
AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical ... 28 3.7
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z50872-2|CAA90755.1| 273|Caenorhabditis elegans Hypothetical pr... 27 6.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 6.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 6.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 6.4
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 230 RKEKHIMEGQFRDCQRDATIEKE---RFKEVIRTLKEEIDRLRMIQSREGANLEYLKNVV 400
R+EK + ++CQ D ++ + +F+E LKEE+ R ++ + NL KNV
Sbjct: 156 RQEKSALVN-LQNCQTDTSVSPDAATKFRERHEKLKEEVQRTKVDYQKTLTNLNEYKNVY 214
Query: 401 M 403
M
Sbjct: 215 M 215
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 230 RKEKHIMEGQFRDCQRDATIEKE---RFKEVIRTLKEEIDRLRMIQSREGANLEYLKNVV 400
R+EK + ++CQ D ++ + +F+E LKEE+ R ++ + NL KNV
Sbjct: 162 RQEKSALVN-LQNCQTDTSVSPDAATKFRERHEKLKEEVQRTKVDYQKTLTNLNEYKNVY 220
Query: 401 M 403
M
Sbjct: 221 M 221
>AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical
protein Y54B9A.1 protein.
Length = 129
Score = 30.3 bits (65), Expect = 0.69
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 184 LRARTRQEGPRYIATQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
LR T + R T+ GE H G +G R + G+ R TH
Sbjct: 30 LRGETHRGETRRGETRRGETHRGETHRGETHRGETHRGETHRGETH 75
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 187 RARTRQEGPRYIATQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
R TR+ T GE H G +G R + G+ R TH
Sbjct: 41 RGETRRGETHRGETHRGETHRGETHRGETHRGETHRGETYRGETH 85
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 226 TQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
T GE H G +G R + G+ R TH
Sbjct: 64 THRGETHRGETHRGETYRGETHRGETHRGETH 95
>U88182-1|AAB42309.1| 101|Caenorhabditis elegans Hypothetical
protein C53C11.4 protein.
Length = 101
Score = 29.9 bits (64), Expect = 0.91
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 184 LRARTRQEGPRYIATQEGEAHHGRPVQGLPTRCDNREGKVQRSHT 318
LR T + + T GEAH G +G R + R G+ R T
Sbjct: 30 LRGETHRGETHHGETHRGEAHRGETHRGETHRGETRRGETHRGET 74
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 226 TQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
T GE H G +G R + G+ +R TH
Sbjct: 39 THHGETHRGEAHRGETHRGETHRGETRRGETH 70
>AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein.
Length = 741
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 164 APPHMLHYAHELARKDLDISQLRKEKHIMEGQFRDCQRDATIEKER---FKEVIRTLKEE 334
A H A L +D+++L+ EKH + Q C+ D K+R E + +E
Sbjct: 650 AANHQSSDAKRLETLCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQSVLSEELERANDE 709
Query: 335 IDRLR 349
I RLR
Sbjct: 710 ISRLR 714
>AF016660-3|AAN84803.1| 376|Caenorhabditis elegans Hypothetical
protein F53A10.2b protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 164 APPHMLHYAHELARKDLDISQLRKEKHIMEGQFRDCQRDATIEKER---FKEVIRTLKEE 334
A H A L +D+++L+ EKH + Q C+ D K+R E + +E
Sbjct: 285 AANHQSSDAKRLETLCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQSVLSEELERANDE 344
Query: 335 IDRLR 349
I RLR
Sbjct: 345 ISRLR 349
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 164 APPHMLHYAHELARKDLDISQLRKEKHIMEGQFRDCQRDATIEKER---FKEVIRTLKEE 334
A H A L +D+++L+ EKH + Q C+ D K+R E + +E
Sbjct: 720 AANHQSSDAKRLETLCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQSVLSEELERANDE 779
Query: 335 IDRLR 349
I RLR
Sbjct: 780 ISRLR 784
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 164 APPHMLHYAHELARKDLDISQLRKEKHIMEGQFRDCQRDATIEKER---FKEVIRTLKEE 334
A H A L +D+++L+ EKH + Q C+ D K+R E + +E
Sbjct: 651 AANHQSSDAKRLETLCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQSVLSEELERANDE 710
Query: 335 IDRLR 349
I RLR
Sbjct: 711 ISRLR 715
>AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical
protein Y41D4B.16 protein.
Length = 453
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 18 TRSRSSCSATGIRPYSRRPTTSSGARTNAPGELAPKT 128
T S S ++T + PTT++GA TN+P P T
Sbjct: 375 TASTPSIASTATSAATNPPTTTAGASTNSPATNPPTT 411
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>Z82069-5|CAB04906.2| 739|Caenorhabditis elegans Hypothetical
protein W04A8.6 protein.
Length = 739
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/73 (21%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 224 QLRKEKHIMEGQFRDCQRDATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLKNVVM 403
Q+RK + ++ + + + +EK+ +V++ L+E +R+ ++ G + + ++
Sbjct: 375 QIRKSHDRLRHKYSELKANIEVEKKMKTDVLKMLQEANERIEQLEKTRGNSHDDSSLLIP 434
Query: 404 AYLL---SSDYAG 433
+Y L SS+ AG
Sbjct: 435 SYSLHDASSEGAG 447
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +2
Query: 278 DATIEKERFKEVIRTLKEEIDRLRMIQSREGA-----NLEYLKNVVMAYL 412
DA R LK+EI RL + RE N+EYLKNV + +L
Sbjct: 552 DAETANGRLTTQNSLLKDEIRRLEREEKREAELSNEKNMEYLKNVFVQFL 601
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +2
Query: 278 DATIEKERFKEVIRTLKEEIDRLRMIQSREGA-----NLEYLKNVVMAYL 412
DA R LK+EI RL + RE N+EYLKNV + +L
Sbjct: 554 DAETANGRLTTQNSLLKDEIRRLEREEKREAELSNEKNMEYLKNVFVQFL 603
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 287 IEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLKN 394
+EK+ +E I L+ E D+L+ I E AN L++
Sbjct: 892 VEKKALEETISQLRSENDKLKKIMRGESANKPVLRS 927
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 287 IEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLKN 394
+EK+ +E I L+ E D+L+ I E AN L++
Sbjct: 892 VEKKALEETISQLRSENDKLKKIMRGESANKPVLRS 927
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 RHEEQVLMQRDRYSALLEE-TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYA 190
RHEE ++R ++ +++ + N + + +A + + SE A
Sbjct: 1689 RHEELANLRRGKHQKVIDRLSQNMMEAASRKAEAEGVKQAVENLRQWSEQTA--QRTRQP 1746
Query: 191 HELARKDLDISQLRKEKHIMEGQFRDCQRDATIEK 295
+L +LD+ + RK++ ++ G+ + R A IE+
Sbjct: 1747 VQLPLTELDLHEARKDEQVLHGEIEN--RLALIEE 1779
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 287 IEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLKN 394
+EK+ +E I L+ E D+L+ I E AN L++
Sbjct: 890 VEKKALEETISQLRSENDKLKKIMRGESANKPVLRS 925
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 28.3 bits (60), Expect = 2.8
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 71 TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYAHELARKDLDISQLRKEKHIM 250
TDN + +A+ V GW E + ++SA L A EL + + K +
Sbjct: 2795 TDNHFMSEQVKAQLVELRSGWDE--LRTKSALKTQRLREAFELHSLQRKVEDIEKWLDKV 2852
Query: 251 EGQFR--DCQRDATIEKERFKEVIRTLKEEI 337
EG+ D RD + E + + TL+ EI
Sbjct: 2853 EGELSSDDHGRD-ILSTELLIKKLDTLQTEI 2882
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 28.3 bits (60), Expect = 2.8
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 71 TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYAHELARKDLDISQLRKEKHIM 250
TDN + +A+ V GW E + ++SA L A EL + + K +
Sbjct: 2795 TDNHFMSEQVKAQLVELRSGWDE--LRTKSALKTQRLREAFELHSLQRKVEDIEKWLDKV 2852
Query: 251 EGQFR--DCQRDATIEKERFKEVIRTLKEEI 337
EG+ D RD + E + + TL+ EI
Sbjct: 2853 EGELSSDDHGRD-ILSTELLIKKLDTLQTEI 2882
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 226 TQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
T GE H G +G R + GK R TH
Sbjct: 40 THRGETHRGETHRGETHRGETHRGKTHRGETH 71
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 226 TQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
T GE H G+ +G R + G+ +R TH
Sbjct: 55 THRGETHRGKTHRGETHRGETHRGETRRGETH 86
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 226 TQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
T GE H G+ +G R + G+ R TH
Sbjct: 25 THRGETHRGKTHRGETHRGETHRGETHRGETH 56
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 226 TQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
T GE H G +G R + G+ R TH
Sbjct: 20 THRGETHRGETHRGKTHRGETHRGETHRGETH 51
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 226 TQEGEAHHGRPVQGLPTRCDNREGKVQRSHTH 321
+ GE H G +G R + GK R TH
Sbjct: 10 SHRGETHRGETHRGETHRGETHRGKTHRGETH 41
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 278 DATIEKERFKEVI-RTLKEEIDRLRMIQSREGANLEYLK 391
+A++ +ER ++ R ++EE DRLR++ RE A E L+
Sbjct: 24 EASLARERQRDAENRRIREEQDRLRVLFEREKAERERLE 62
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 278 DATIEKERFKEVI-RTLKEEIDRLRMIQSREGANLEYLK 391
+A++ +ER ++ R ++EE DRLR++ RE A E L+
Sbjct: 24 EASLARERQRDAENRRIREEQDRLRVLFEREKAERERLE 62
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 278 DATIEKERFKEVI-RTLKEEIDRLRMIQSREGANLEYLK 391
+A++ +ER ++ R ++EE DRLR++ RE A E L+
Sbjct: 24 EASLARERQRDAENRRIREEQDRLRVLFEREKAERERLE 62
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 28.3 bits (60), Expect = 2.8
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 71 TDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYAHELARKDLDISQLRKEKHIM 250
TDN + +A+ V GW E + ++SA L A EL + + K +
Sbjct: 2795 TDNHFMSEQVKAQLVELRSGWDE--LRTKSALKTQRLREAFELHSLQRKVEDIEKWLDKV 2852
Query: 251 EGQFR--DCQRDATIEKERFKEVIRTLKEEI 337
EG+ D RD + E + + TL+ EI
Sbjct: 2853 EGELSSDDHGRD-ILSTELLIKKLDTLQTEI 2882
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical protein
C04A11.3 protein.
Length = 1228
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 203 RKDLDISQLRKEKHIMEGQFR---DCQRDATIEKERFKEVIRTLKEEIDRLRMIQSRE 367
RK+++ ++ +E + Q R + ++D KER K+ ++ K+E+ L +Q ++
Sbjct: 891 RKEIEDTEGAQEHELRNAQKRLRIEQEKDMRAFKERLKQEMKIFKQELTMLSKVQRKD 948
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 291 RRKGSKKSYAP*RRRLIGSV*SSPGRART 377
R+ GS+K Y+P RRR + +SP R R+
Sbjct: 466 RQLGSRKQYSPLRRRQSSPMVASPRRRRS 494
>DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian
stromal interaction molecule-1 protein.
Length = 530
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 RDCQRD-ATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLK 391
R C+ + A +EK+R ++ + +KE I+ + +Q ++G+ L LK
Sbjct: 296 RTCENEMAFLEKQR-QDCFKEMKEAIEMVDRLQKKQGSVLSSLK 338
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 291 RRKGSKKSYAP*RRRLIGSV*SSPGRART 377
R+ GS+K Y+P RRR + +SP R R+
Sbjct: 466 RQLGSRKQYSPLRRRQSSPMVASPRRRRS 494
>AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1c protein.
Length = 395
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 RDCQRD-ATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLK 391
R C+ + A +EK+R ++ + +KE I+ + +Q ++G+ L LK
Sbjct: 296 RTCENEMAFLEKQR-QDCFKEMKEAIEMVDRLQKKQGSVLSSLK 338
>AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1a protein.
Length = 530
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 RDCQRD-ATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLK 391
R C+ + A +EK+R ++ + +KE I+ + +Q ++G+ L LK
Sbjct: 296 RTCENEMAFLEKQR-QDCFKEMKEAIEMVDRLQKKQGSVLSSLK 338
>AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 RDCQRD-ATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLK 391
R C+ + A +EK+R ++ + +KE I+ + +Q ++G+ L LK
Sbjct: 296 RTCENEMAFLEKQR-QDCFKEMKEAIEMVDRLQKKQGSVLSSLK 338
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 27.5 bits (58), Expect = 4.8
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 203 RKDLDISQLRKEK---HIMEGQFRDCQRDATIEKERFKEVIRTLKEEIDRLRMIQSREGA 373
RKDLD+S+L+ K I E Q + + +A + R KEV+ + E L +
Sbjct: 110 RKDLDLSKLQNAKDKLEIYETQEENQKLEAEVNALR-KEVLESKLSEQSELSKVNETLNM 168
Query: 374 NLEYLK 391
+E LK
Sbjct: 169 KVESLK 174
>Z50872-2|CAA90755.1| 273|Caenorhabditis elegans Hypothetical
protein C05D12.4 protein.
Length = 273
Score = 27.1 bits (57), Expect = 6.4
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 236 EKHIMEGQFRDCQ--RDATIEK-ERFKEVIRTLKEEIDRLRMIQSREGANLEYLKNVVMA 406
+K I E ++ + DA EK E EVI+ KE ID++R+ ++ + L +
Sbjct: 100 KKRIQEEMWKKVKVLEDAFDEKVEENNEVIKNQKESIDKMRISRTETSEEHKELVKKINQ 159
Query: 407 YLLSSDYAGRKHMLN 451
+ ++ A R++ N
Sbjct: 160 KMKDTETACRRYEAN 174
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.1 bits (57), Expect = 6.4
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +2
Query: 62 LEETDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYAHELARKDLDISQLRKEK 241
LE T N +R ++ + + D K G + + +L + + D+++L+
Sbjct: 1309 LESTQNRLRSLEDQHSTLQS-DANKWRGELDAALRENDILKSNN--TNMETDLTRLKNRL 1365
Query: 242 HIMEGQFRDCQRD---ATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLKN 394
E ++ + A EKER + R ++ D L + S+ L L+N
Sbjct: 1366 KSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRN 1419
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 6.4
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +2
Query: 62 LEETDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYAHELARKDLDISQLRKEK 241
LE T N +R ++ + + D K G + + +L + + D+++L+
Sbjct: 1382 LESTQNRLRSLEDQHSTLQS-DANKWRGELDAALRENDILKSNN--TNMETDLTRLKNRL 1438
Query: 242 HIMEGQFRDCQRD---ATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLKN 394
E ++ + A EKER + R ++ D L + S+ L L+N
Sbjct: 1439 KSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRN 1492
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 6.4
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +2
Query: 62 LEETDNFIRGKNERARRVSAEDGWKEHGMISESAAPPHMLHYAHELARKDLDISQLRKEK 241
LE T N +R ++ + + D K G + + +L + + D+++L+
Sbjct: 1382 LESTQNRLRSLEDQHSTLQS-DANKWRGELDAALRENDILKSNN--TNMETDLTRLKNRL 1438
Query: 242 HIMEGQFRDCQRD---ATIEKERFKEVIRTLKEEIDRLRMIQSREGANLEYLKN 394
E ++ + A EKER + R ++ D L + S+ L L+N
Sbjct: 1439 KSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRN 1492
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 26.6 bits (56), Expect = 8.4
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +1
Query: 163 RSPPHAALRARTRQEGPRYIATQEGEAHHGRPVQGLPTRCDNREGKVQRSHTHPEGGD** 342
+S A+ ++RT Q G QE + R P R R G+ S +GG
Sbjct: 87 QSDSSASTQSRTNQSGT---IAQETD---NRNASNFPPRSTTRRGQTYESRDESQGGQAP 140
Query: 343 APYDPVPGGREPRILEERGN 402
+ + VPG +R N
Sbjct: 141 SHQNQVPGVDRDEYAGDRSN 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,670,358
Number of Sequences: 27780
Number of extensions: 233177
Number of successful extensions: 852
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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