Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_C08
(396 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089633-1|AAL90371.1| 129|Drosophila melanogaster RE50273p pro... 132 2e-31
AL033125-9|CAA21832.1| 129|Drosophila melanogaster EG:EG0007.11... 132 2e-31
AE014298-598|AAF45920.1| 129|Drosophila melanogaster CG4944-PB,... 132 2e-31
AE014298-597|AAF45919.1| 129|Drosophila melanogaster CG4944-PA,... 132 2e-31
AE014298-599|AAN09116.1| 97|Drosophila melanogaster CG4944-PC,... 120 7e-28
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ... 36 0.026
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr... 34 0.079
AE014297-408|AAF51914.1| 730|Drosophila melanogaster CG1077-PA ... 32 0.32
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P... 31 0.55
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 31 0.55
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P... 28 5.2
EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein. 27 6.8
AY094789-1|AAM11142.1| 1593|Drosophila melanogaster LD15472p pro... 27 6.8
AE014135-149|AAF59405.4| 2874|Drosophila melanogaster CG2999-PC,... 27 6.8
AE014135-148|AAN06592.1| 2871|Drosophila melanogaster CG2999-PA,... 27 6.8
EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein. 27 9.0
EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein. 27 9.0
EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein. 27 9.0
EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein. 27 9.0
EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein. 27 9.0
EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein. 27 9.0
EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein. 27 9.0
>AY089633-1|AAL90371.1| 129|Drosophila melanogaster RE50273p
protein.
Length = 129
Score = 132 bits (318), Expect = 2e-31
Identities = 59/98 (60%), Positives = 75/98 (76%)
Frame = +2
Query: 95 APSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFD 274
AP+LKDLP VA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 5 APALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFN 64
Query: 275 ATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFD 388
+LKHTET EKNPLPDK+ + EK + G+E+FD
Sbjct: 65 QNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFD 102
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = +2
Query: 146 LEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPD 325
+ FN + L+ +TNEK LP E + EK + GIE FDA LKHTET EKN LP
Sbjct: 60 ITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPT 119
Query: 326 KDVVAAEK 349
K+V+ AEK
Sbjct: 120 KEVIEAEK 127
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 206 PSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHF 385
P+ +D+ K ++L +E F+ LK+ TQEK LP + VAAEK Q++ EG+ F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 386 DK 391
++
Sbjct: 64 NQ 65
Score = 31.1 bits (67), Expect = 0.55
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 128 NDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEK 235
N + +E F+ L+ +TNEK VLP+ E + EK
Sbjct: 92 NQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AL033125-9|CAA21832.1| 129|Drosophila melanogaster EG:EG0007.11
protein.
Length = 129
Score = 132 bits (318), Expect = 2e-31
Identities = 59/98 (60%), Positives = 75/98 (76%)
Frame = +2
Query: 95 APSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFD 274
AP+LKDLP VA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 5 APALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFN 64
Query: 275 ATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFD 388
+LKHTET EKNPLPDK+ + EK + G+E+FD
Sbjct: 65 QNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFD 102
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = +2
Query: 146 LEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPD 325
+ FN + L+ +TNEK LP E + EK + GIE FDA LKHTET EKN LP
Sbjct: 60 ITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPT 119
Query: 326 KDVVAAEK 349
K+V+ AEK
Sbjct: 120 KEVIEAEK 127
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 206 PSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHF 385
P+ +D+ K ++L +E F+ LK+ TQEK LP + VAAEK Q++ EG+ F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 386 DK 391
++
Sbjct: 64 NQ 65
Score = 31.1 bits (67), Expect = 0.55
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 128 NDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEK 235
N + +E F+ L+ +TNEK VLP+ E + EK
Sbjct: 92 NQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AE014298-598|AAF45920.1| 129|Drosophila melanogaster CG4944-PB,
isoform B protein.
Length = 129
Score = 132 bits (318), Expect = 2e-31
Identities = 59/98 (60%), Positives = 75/98 (76%)
Frame = +2
Query: 95 APSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFD 274
AP+LKDLP VA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 5 APALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFN 64
Query: 275 ATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFD 388
+LKHTET EKNPLPDK+ + EK + G+E+FD
Sbjct: 65 QNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFD 102
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = +2
Query: 146 LEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPD 325
+ FN + L+ +TNEK LP E + EK + GIE FDA LKHTET EKN LP
Sbjct: 60 ITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPT 119
Query: 326 KDVVAAEK 349
K+V+ AEK
Sbjct: 120 KEVIEAEK 127
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 206 PSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHF 385
P+ +D+ K ++L +E F+ LK+ TQEK LP + VAAEK Q++ EG+ F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 386 DK 391
++
Sbjct: 64 NQ 65
Score = 31.1 bits (67), Expect = 0.55
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 128 NDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEK 235
N + +E F+ L+ +TNEK VLP+ E + EK
Sbjct: 92 NQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AE014298-597|AAF45919.1| 129|Drosophila melanogaster CG4944-PA,
isoform A protein.
Length = 129
Score = 132 bits (318), Expect = 2e-31
Identities = 59/98 (60%), Positives = 75/98 (76%)
Frame = +2
Query: 95 APSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFD 274
AP+LKDLP VA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 5 APALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFN 64
Query: 275 ATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFD 388
+LKHTET EKNPLPDK+ + EK + G+E+FD
Sbjct: 65 QNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFD 102
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = +2
Query: 146 LEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPD 325
+ FN + L+ +TNEK LP E + EK + GIE FDA LKHTET EKN LP
Sbjct: 60 ITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPT 119
Query: 326 KDVVAAEK 349
K+V+ AEK
Sbjct: 120 KEVIEAEK 127
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 206 PSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHF 385
P+ +D+ K ++L +E F+ LK+ TQEK LP + VAAEK Q++ EG+ F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 386 DK 391
++
Sbjct: 64 NQ 65
Score = 31.1 bits (67), Expect = 0.55
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 128 NDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEK 235
N + +E F+ L+ +TNEK VLP+ E + EK
Sbjct: 92 NQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AE014298-599|AAN09116.1| 97|Drosophila melanogaster CG4944-PC,
isoform C protein.
Length = 97
Score = 120 bits (289), Expect = 7e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 95 APSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFD 274
AP+LKDLP VA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 5 APALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFN 64
Query: 275 ATSLKHTETQEKNPLPDKDVVAAEKAHQ 358
+LKHTET EKNPLPDK+ E H+
Sbjct: 65 QNNLKHTETNEKNPLPDKEGEGEESVHR 92
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 206 PSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHF 385
P+ +D+ K ++L +E F+ LK+ TQEK LP + VAAEK Q++ EG+ F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 386 DK 391
++
Sbjct: 64 NQ 65
>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
protein.
Length = 5412
Score = 35.5 bits (78), Expect = 0.026
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 200 VLPSAEDVATEKTQKSLFDGI-EKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGV 376
VL S +D + T+KS + + E F A S K EK+PL KD+ E A +N+++ V
Sbjct: 1662 VLESVKDEPIKSTEKSRRESVAESFKADSTK----DEKSPLTSKDISRPESAVENVMDAV 1717
>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
protein.
Length = 5327
Score = 33.9 bits (74), Expect = 0.079
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 200 VLPSAEDVATEKTQKSLFDGI-EKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLE 370
VL S +D + T+KS + + E F A S K EK+PL KD+ E A +N+++
Sbjct: 1615 VLESVKDEPIKSTEKSRRESVAESFKADSTK----DEKSPLTSKDISRPESAVENVMD 1668
>AE014297-408|AAF51914.1| 730|Drosophila melanogaster CG1077-PA
protein.
Length = 730
Score = 31.9 bits (69), Expect = 0.32
Identities = 12/52 (23%), Positives = 30/52 (57%)
Frame = +2
Query: 203 LPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQ 358
L +AE++ +++ + + +G+ D+T +KH+ Q+ P D +++H+
Sbjct: 173 LVNAENIKSQRNWRIVSEGLCGEDSTKMKHSRKQKPKAKPKSDAERTKRSHR 224
>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
isoform D protein.
Length = 7210
Score = 31.1 bits (67), Expect = 0.55
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 128 NDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQE 307
++L+SQ + + D D + K S ED+ E + + + ++ D S K TETQE
Sbjct: 2212 SELQSQSDVSSPESALDTDIDLKEGSGSQEDIEPEAKRPKMLESEQQLD--SYKQTETQE 2269
Query: 308 KNPLPDKDVVAAEKAHQNLLE 370
+ P D + ++ LE
Sbjct: 2270 EVPKETDDETKKDIEVESKLE 2290
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 31.1 bits (67), Expect = 0.55
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 128 NDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQE 307
++L+SQ + + D D + K S ED+ E + + + ++ D S K TETQE
Sbjct: 2212 SELQSQSDVSSPESALDTDIDLKEGSGSQEDIEPEAKRPKMLESEQQLD--SYKQTETQE 2269
Query: 308 KNPLPDKDVVAAEKAHQNLLE 370
+ P D + ++ LE
Sbjct: 2270 EVPKETDDETKKDIEVESKLE 2290
>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
protein.
Length = 1960
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Frame = +2
Query: 89 GDAPSLKDLP--------NVANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQK 244
GD+P KDL N Q TS + T+ + + + +K
Sbjct: 607 GDSPIFKDLKLSSEADATRATNPAAQQAVLDLTSNQYKISTSNNPAPMKVKALGSTLNRK 666
Query: 245 SLFDGIEKFDAT 280
SLFDG+E+FDA+
Sbjct: 667 SLFDGLEEFDAS 678
>EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 161 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDAT 280
TS + T+ + + + +KSLFDG+E+FDA+
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>AY094789-1|AAM11142.1| 1593|Drosophila melanogaster LD15472p
protein.
Length = 1593
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 38 FNLPSIFIPD*TMACSVGDAPSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPS 211
F LP + P M S D + D NV N+ + + N+ DV++ + LPS
Sbjct: 774 FELPEL--PQPIMDLSENDTATQSDSFNVINNTLTNADNLNSYNQMDVESKSSLQLPS 829
>AE014135-149|AAF59405.4| 2874|Drosophila melanogaster CG2999-PC,
isoform C protein.
Length = 2874
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 38 FNLPSIFIPD*TMACSVGDAPSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPS 211
F LP + P M S D + D NV N+ + + N+ DV++ + LPS
Sbjct: 774 FELPEL--PQPIMDLSENDTATQSDSFNVINNTLTNADNLNSYNQMDVESKSSLQLPS 829
>AE014135-148|AAN06592.1| 2871|Drosophila melanogaster CG2999-PA,
isoform A protein.
Length = 2871
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 38 FNLPSIFIPD*TMACSVGDAPSLKDLPNVANDLKSQLEGFNTSCLRDVDTNEKIVLPS 211
F LP + P M S D + D NV N+ + + N+ DV++ + LPS
Sbjct: 774 FELPEL--PQPIMDLSENDTATQSDSFNVINNTLTNADNLNSYNQMDVESKSSLQLPS 829
>EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 239 QKSLFDGIEKFDAT 280
+KSLFDG+E+FDA+
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 239 QKSLFDGIEKFDAT 280
+KSLFDG+E+FDA+
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 239 QKSLFDGIEKFDAT 280
+KSLFDG+E+FDA+
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 239 QKSLFDGIEKFDAT 280
+KSLFDG+E+FDA+
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 239 QKSLFDGIEKFDAT 280
+KSLFDG+E+FDA+
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 239 QKSLFDGIEKFDAT 280
+KSLFDG+E+FDA+
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 239 QKSLFDGIEKFDAT 280
+KSLFDG+E+FDA+
Sbjct: 50 RKSLFDGLEEFDAS 63
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,669,048
Number of Sequences: 53049
Number of extensions: 392592
Number of successful extensions: 1163
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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