Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_C03
(431 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 149 8e-37
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 148 2e-36
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 147 3e-36
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 141 2e-34
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 140 3e-34
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 117 3e-27
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 68 3e-12
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 29 1.1
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 28 2.5
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z74042-1|CAA98536.1| 444|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 3.3
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 28 3.3
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z70208-8|CAA94143.1| 196|Caenorhabditis elegans Hypothetical pr... 27 7.7
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 149 bits (361), Expect = 8e-37
Identities = 73/121 (60%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Frame = +2
Query: 77 EKLEAGFSKLQ-CSESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVENLDSGVGI 253
+ +E ++KLQ S+ SLLKK+LTK+V K+KKT G+TLLD IQSG ENLDSGVGI
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 254 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPAKNWGD--VETLGNLEPAGEFVVSTRV 427
YAPDAESY++FA+LF+P+IE+YHNGFK TD PA + G+ V L +L+P G+F+VSTR+
Sbjct: 69 YAPDAESYTLFADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRI 128
Query: 428 R 430
R
Sbjct: 129 R 129
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 148 bits (358), Expect = 2e-36
Identities = 75/137 (54%), Positives = 100/137 (72%), Gaps = 3/137 (2%)
Frame = +2
Query: 29 CSSARKAAAMVDAVTIEKLEAGFSKLQCS-ESKSLLKKYLTKEVFEALKNKKTSFGSTLL 205
C A++ ++ V I K+E G++KLQ + E SLLKKYLTKEV + LK+KKT G+ LL
Sbjct: 31 CVQAQEGMSVSPDV-IAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLL 89
Query: 206 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPAKNWGDVET-- 379
D IQSGV NLDSGVG+YAPDAE+Y++F LFDP+I+DYHNGF K P + G+ +T
Sbjct: 90 DVIQSGVANLDSGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSA 149
Query: 380 LGNLEPAGEFVVSTRVR 430
L +L+P G+F+ STR+R
Sbjct: 150 LVDLDPEGKFINSTRIR 166
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 147 bits (356), Expect = 3e-36
Identities = 72/122 (59%), Positives = 93/122 (76%), Gaps = 3/122 (2%)
Frame = +2
Query: 74 IEKLEAGFSKLQCS-ESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVENLDSGVG 250
I K+E G++KLQ + E SLLKKYLTKEV + LK+KKT G+ LLD IQSGV NLDSGVG
Sbjct: 8 IAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANLDSGVG 67
Query: 251 IYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPAKNWGDVET--LGNLEPAGEFVVSTR 424
+YAPDAE+Y++F LFDP+I+DYHNGF K P + G+ +T L +L+P G+F+ STR
Sbjct: 68 VYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTR 127
Query: 425 VR 430
+R
Sbjct: 128 IR 129
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 141 bits (342), Expect = 2e-34
Identities = 73/134 (54%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
Frame = +2
Query: 44 KAAAMVDAVTIEKLEAGFSKLQCSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 214
+A + VDA TI+K+E ++KL E KSLLKK+LTKEV E LK K+T G+TL DCI
Sbjct: 64 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123
Query: 215 QSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPAKNWGDVET--LGN 388
+SGV NLD+GVG+YAPDAE+Y++FA LFD IIEDYH GF K P + G+ +T
Sbjct: 124 RSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPP 182
Query: 389 LEPAGEFVVSTRVR 430
L+P G+++ STR+R
Sbjct: 183 LDPKGKYIKSTRIR 196
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 140 bits (340), Expect = 3e-34
Identities = 72/134 (53%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
Frame = +2
Query: 44 KAAAMVDAVTIEKLEAGFSKLQCSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 214
+A + VDA TI+K+E ++KL E KSLLKK+LTK+V E LK K+T G+TL DCI
Sbjct: 36 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95
Query: 215 QSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPAKNWGDVET--LGN 388
+SGV NLD+GVG+YAPDAE+Y++FA LFD IIEDYH GF K P + G+ +T
Sbjct: 96 RSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPP 154
Query: 389 LEPAGEFVVSTRVR 430
L+P G+++ STR+R
Sbjct: 155 LDPKGKYIKSTRIR 168
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 117 bits (282), Expect = 3e-27
Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 5/129 (3%)
Frame = +2
Query: 59 VDAVTIEKLEAGFSKLQCSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVE 229
VD VTI+K+E + L + SLLKK LTK+V E LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 230 NLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPAKNWGDVET--LGNLEPAG 403
LD+ VG+YAPDAE+Y++FA LFD IIEDYH G K P + G+ +T L+P G
Sbjct: 74 CLDALVGVYAPDAEAYTLFAPLFDKIIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKG 132
Query: 404 EFVVSTRVR 430
+++ STR+R
Sbjct: 133 KYIKSTRIR 141
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 67.7 bits (158), Expect = 3e-12
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +2
Query: 44 KAAAMVDAVTIEKLEAGFSKLQCSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 214
+A + VDA TI+K+E + KL E KSLL+KYLTK++ E LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 215 QSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPAKNWGDVET 379
+G+ + G+ F LF+ IED++ GF +K P + G+ +T
Sbjct: 146 LTGLRFVRQGLR-----------FVALFNKNIEDFY-GFSPKEKQPPVDLGEGKT 188
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 162 KPLRIKRPHLALPCWIASNQV*RTWTLVSEST---PLTRSRTLCLPSCSIPSSRTTITVL 332
KP+ R L P + + T+T S+S+ + SRT L S ++P + +
Sbjct: 866 KPIAPGRASLPPPTLVTESSSESTFTDKSDSSVTVAASASRTSTLTSSTLPPPPSLPKTI 925
Query: 333 RRPTSTPP 356
+P STPP
Sbjct: 926 EKPISTPP 933
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 231 TWTLVSESTPLTRSRTLCLPSCSIPSSRTTITVLRRPTSTPP 356
T T + +TP + + T +P + S+ TT T+ TST P
Sbjct: 200 TTTTETTTTPQSTTTTTTVPPTTTTSTTTTTTIATTTTSTSP 241
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 174 FLRASKT-SLVRYFFNSDFDSEHWSLLKPASNFSMVTASTIAAAFLALEQPSES 16
FL S T +L++ FN +D + +KP+ + +MVT + L+++Q E+
Sbjct: 22 FLETSNTETLLQQLFNQTYDVD----MKPSDDLTMVTITPNTFILLSMDQTQET 71
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 177 LFLRASKTSLVRYFFNSDFDSEHWSLLKPASNFSMVTASTI--AAAFLAL 34
LF T++ +F N DF EHW + + F +++ AAAF L
Sbjct: 1679 LFKTIRNTTMADFFMN-DFTKEHWQKVAAKNAFVLMSKQRFQHAAAFFLL 1727
>Z74042-1|CAA98536.1| 444|Caenorhabditis elegans Hypothetical
protein T11F9.1 protein.
Length = 444
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 2 TMLAVDSDGCSSARKAAAMVDAVTIEKLEAGFSKLQCSESKSLLKKYLTK 151
T+L V+SD + ++ ++ ++ GFS + K L KY +K
Sbjct: 376 TVLIVESDQKKDSSATCTVIRKNSLHRMNGGFSDMSEKRFKQFLNKYNSK 425
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 231 TWTLVSESTPLTRSRTLCLPSCSIPSSRTTITVLRRPTSTPPRT 362
T T + + P T + T + ++P+S +TI+ T+TP T
Sbjct: 269 TTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTT 312
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 301 IEQLGKHRVRLRVRGVDSDTRVQVLYT*LDAIQQGRAK*GLFILKGFE 158
IE RVR + + D +Q+L T D I + AK G +I+K F+
Sbjct: 85 IETTSGARVRANILKGNYDAAIQILETSNDHITEETAKHGSYIVKCFK 132
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 27.5 bits (58), Expect = 4.4
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 35 SARKAAAMVDAVTIEKLEAGFSKLQCSES--KSLLKKYLTKEVFE-ALKNKKTSFGSTLL 205
S + AAA VD + E ++A +KLQ E +L L + E L+ + FG +
Sbjct: 157 SPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVIS 216
Query: 206 DCIQSGVENLDSGVGIYAPDAE 271
I +N GVG D++
Sbjct: 217 TRILRTPDNQSRGVGFARMDSK 238
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 27.5 bits (58), Expect = 4.4
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 35 SARKAAAMVDAVTIEKLEAGFSKLQCSES--KSLLKKYLTKEVFE-ALKNKKTSFGSTLL 205
S + AAA VD + E ++A +KLQ E +L L + E L+ + FG +
Sbjct: 131 SPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVIS 190
Query: 206 DCIQSGVENLDSGVGIYAPDAE 271
I +N GVG D++
Sbjct: 191 TRILRTPDNQSRGVGFARMDSK 212
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 275 YSVFAELFDPIIEDYHNGFKKTDKHPAKNWGDVETLGNLEPAGEF 409
+S+ D + D NGFK +H + + D+E N + +F
Sbjct: 143 FSISRNYSDSPLTDLENGFKLITRHQKRRYIDIEDRINFQNLTDF 187
>Z70208-8|CAA94143.1| 196|Caenorhabditis elegans Hypothetical
protein F54B11.8 protein.
Length = 196
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 104 LQCSESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVENLDSG 244
LQC + + +KK T+ + K K S G LDC Q+ L G
Sbjct: 74 LQCVDCEEGVKKRFTQLLSSMYKISKDSEGYINLDCTQTAAMYLLKG 120
>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical
protein K10B2.5 protein.
Length = 1009
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 27 VVQVPEKPQQ-WWTP*PSRNWRL 92
V + P+KP WW+P WRL
Sbjct: 49 VKETPQKPDMSWWSPSRGDTWRL 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,400,288
Number of Sequences: 27780
Number of extensions: 192589
Number of successful extensions: 739
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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