Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_C02
         (409 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    29   1.8  
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    29   1.8  
AY089243-1|AAL89981.1|  550|Drosophila melanogaster AT03107p pro...    28   4.1  
AE014297-176|AAF52075.1|  550|Drosophila melanogaster CG14662-PA...    28   4.1  

>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +3

Query: 228 HLYNFKYNI--IFFKEIYSIELK*LIIYKLY 314
           H +NFKY I  +F+ E+Y   L  +++Y LY
Sbjct: 185 HFHNFKYFILFLFYAEVYCFYLFCVMVYDLY 215


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +3

Query: 228 HLYNFKYNI--IFFKEIYSIELK*LIIYKLY 314
           H +NFKY I  +F+ E+Y   L  +++Y LY
Sbjct: 163 HFHNFKYFILFLFYAEVYCFYLFCVMVYDLY 193


>AY089243-1|AAL89981.1|  550|Drosophila melanogaster AT03107p
           protein.
          Length = 550

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
 Frame = -3

Query: 218 LSYIFKFGTFRIH--WLFGREYINLNS**I----FSKLNYIIYFNIINVLNN---VTLYY 66
           L  +  FGT R++  WL G +    N+  +    F K  Y      I  ++N   VT Y+
Sbjct: 436 LGMLIVFGTLRLNPSWLRGNKRRESNTIGLIQGRFEKDPYEQVGGPIATIDNNEYVTAYH 495

Query: 65  KHL*QVDHNSEWLIKFILPPR 3
           ++L Q +H      K+I PPR
Sbjct: 496 RYLEQANHRPTESNKYIRPPR 516


>AE014297-176|AAF52075.1|  550|Drosophila melanogaster CG14662-PA
           protein.
          Length = 550

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
 Frame = -3

Query: 218 LSYIFKFGTFRIH--WLFGREYINLNS**I----FSKLNYIIYFNIINVLNN---VTLYY 66
           L  +  FGT R++  WL G +    N+  +    F K  Y      I  ++N   VT Y+
Sbjct: 436 LGMLIVFGTLRLNPSWLRGNKRRESNTIGLIQGRFEKDPYEQVGGPIATIDNNEYVTAYH 495

Query: 65  KHL*QVDHNSEWLIKFILPPR 3
           ++L Q +H      K+I PPR
Sbjct: 496 RYLEQANHRPTESNKYIRPPR 516


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,281,355
Number of Sequences: 53049
Number of extensions: 173126
Number of successful extensions: 202
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)