Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_C01
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83104-4|CAB05478.2| 582|Caenorhabditis elegans Hypothetical pr... 71 5e-13
AC025723-2|AAK29943.1| 581|Caenorhabditis elegans Hypothetical ... 69 3e-12
AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical ... 63 1e-10
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 31 0.35
Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical pr... 31 0.61
AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical ... 31 0.61
Z75533-5|CAA99818.1| 188|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 7.6
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 27 7.6
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 27 7.6
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 27 7.6
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 27 7.6
Z69792-2|CAA93667.1| 417|Caenorhabditis elegans Hypothetical pr... 27 10.0
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 27 10.0
>Z83104-4|CAB05478.2| 582|Caenorhabditis elegans Hypothetical
protein F09B12.3 protein.
Length = 582
Score = 70.9 bits (166), Expect = 5e-13
Identities = 38/136 (27%), Positives = 66/136 (48%)
Frame = +2
Query: 83 LYVSHNAAGPYSSMTRILKRYKLNYHLTSKHTESIPGTIVDFSGYPGSVTSQDEFYIVKG 262
L++S + +M R++K YK Y + PG FS YPG + S D+F +
Sbjct: 251 LFISQVTMSGFQNMLRVIKLYKFGYD-----RQFYPGYASSFSSYPGLLYSSDDFAL--- 302
Query: 263 ENHEMVITGTTLKNYNNKMWKDVDINKQVPAGPRIFAANHLATNVSSWGHILANSNSGTA 442
+ + + TT+ +N ++++ Q+P R +N LA + W + + NSGT
Sbjct: 303 QTSGLAVIETTISVFNTSLFENTKPVGQLPTWIRAIVSNQLARDAREWCKLYSLYNSGTY 362
Query: 443 SKQWLVIDFTKLTVDQ 490
+ QW V+D+ K +Q
Sbjct: 363 NNQWAVLDYKKFKPNQ 378
>AC025723-2|AAK29943.1| 581|Caenorhabditis elegans Hypothetical
protein Y54F10AM.8 protein.
Length = 581
Score = 68.5 bits (160), Expect = 3e-12
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +2
Query: 77 KKLYVSHNAAGPYSSMTRILKRYKLNYHLTSKHTESIPGTIVDFSGYPGSVTSQDEFYIV 256
K ++++H + S M R+LK YK Y + +PG IV FSGYPG + S D++ I
Sbjct: 240 KDMFMAHVSMSSLSWMQRVLKIYKFGYDVNE-----VPGHIVTFSGYPGVLISTDDYTIT 294
Query: 257 KGENHEMVITGTTLKNYNNKMWKD--VDINKQVPAGPRIFAANHLATNVSSWGHILANSN 430
+ TT+ +N ++ D + QV R +N L+ W + N
Sbjct: 295 SA---GLTSIETTIAIFNQTLYTDKFMKPEGQVHCWIRSMISNLLSRTGKQWVDMFGRYN 351
Query: 431 SGTASKQWLVIDFTKLTVDQ 490
SGT + QW V+D+ + T ++
Sbjct: 352 SGTYNNQWTVLDWKQFTPEK 371
>AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical
protein Y37D8A.2 protein.
Length = 571
Score = 62.9 bits (146), Expect = 1e-10
Identities = 40/126 (31%), Positives = 57/126 (45%)
Frame = +2
Query: 92 SHNAAGPYSSMTRILKRYKLNYHLTSKHTESIPGTIVDFSGYPGSVTSQDEFYIVKGENH 271
SH Y +M RI K+Y PG I FS YP S+TS D+F +
Sbjct: 228 SHVTWSSYGTMLRINKKYSFK--------TGDPGQIYSFSSYPASITSTDDFVLTSA--- 276
Query: 272 EMVITGTTLKNYNNKMWKDVDINKQVPAGPRIFAANHLATNVSSWGHILANSNSGTASKQ 451
++ I TT+ NYN K D+ V R A+ A++ W NSGT + +
Sbjct: 277 KLAILETTIGNYNEKS-LDLITPNTVLTWIRAEIAHRTASSGLQWAEAFGRHNSGTYNNE 335
Query: 452 WLVIDF 469
W+V+D+
Sbjct: 336 WVVVDY 341
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 31.5 bits (68), Expect = 0.35
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 224 SVTSQDEFYIVKGENHEMVITGTTLKNYNNKMWKDVDINKQVPAGPRIFAANHLATNVSS 403
S T FY++ GEN+E++ T ++ +Y + + K V V F AT S
Sbjct: 183 STTDNIRFYVMNGENYELIDTAQSIDSYFDTVQKVV---VDVEEDGEFFIKGKSATPKSL 239
Query: 404 WGHILANSNSG 436
+G ++S+ G
Sbjct: 240 FGTQSSSSHGG 250
>Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 146 KLNYHLTSKHTESIPGTIVDFSGYPGSVTSQDEFYIVKGENHEMVITGTTLKNYNNK 316
K ++HLT+ + G +DFS +PGS ++ +K + V+T K Y +K
Sbjct: 114 KPSHHLTNSAIAKLEGHFLDFSPFPGSPANEK---FLKRADPSHVVTTIRGKKYQDK 167
>AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 146 KLNYHLTSKHTESIPGTIVDFSGYPGSVTSQDEFYIVKGENHEMVITGTTLKNYNNK 316
K ++HLT+ + G +DFS +PGS ++ +K + V+T K Y +K
Sbjct: 114 KPSHHLTNSAIAKLEGHFLDFSPFPGSPANEK---FLKRADPSHVVTTIRGKKYQDK 167
>Z75533-5|CAA99818.1| 188|Caenorhabditis elegans Hypothetical
protein C54G4.6 protein.
Length = 188
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 149 LNYHLTSKHTESIPGTIVDFSGYPGSVTSQDEFYIVKGE 265
L+YH T ++ E I TIV F P V + Y+ GE
Sbjct: 107 LHYHETDQYEEIIEKTIVHFGDIPDRVIDE---YVKSGE 142
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 266 NHEMVITGTTLKNYNNKMW 322
NH+++ITGT L+N ++W
Sbjct: 560 NHKLLITGTPLQNSLKELW 578
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 212 GYPGSVTSQDEFYIVKGENHEMVITGTTLKNYNNKMW 322
G GS T+ ++ + K +N V+TG LKNY W
Sbjct: 744 GLIGSSTNLND--VEKPQNSWAVVTGDQLKNYKKSDW 778
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 212 GYPGSVTSQDEFYIVKGENHEMVITGTTLKNYNNKMW 322
G GS T+ ++ + K +N V+TG LKNY W
Sbjct: 744 GLIGSSTNLND--VEKPQNSWAVVTGDQLKNYKKSDW 778
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 212 GYPGSVTSQDEFYIVKGENHEMVITGTTLKNYNNKMW 322
G GS T+ ++ + K +N V+TG LKNY W
Sbjct: 744 GLIGSSTNLND--VEKPQNSWAVVTGDQLKNYKKSDW 778
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 212 GYPGSVTSQDEFYIVKGENHEMVITGTTLKNYNNKMW 322
G GS T+ ++ + K +N V+TG LKNY W
Sbjct: 744 GLIGSSTNLND--VEKPQNSWAVVTGDQLKNYKKSDW 778
>Z69792-2|CAA93667.1| 417|Caenorhabditis elegans Hypothetical
protein F40E10.3 protein.
Length = 417
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 218 PGSVTSQDEFYIVKGENHEMVITGTTLKNYNNKMWKD 328
P S +++EF +N E V+ TL NY N +W+D
Sbjct: 237 PTSADTEEEFEDWVEKNKEPVMQKLTLDNYFN-LWRD 272
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 191 GTIVDFSGYPGSVTSQDEFYIVKGENHEMVITGTTLKNYNNKMWK 325
G++V Y SVT QD Y ++ V + KMWK
Sbjct: 253 GSLVANYPYDDSVTGQDGIYTASADDKLFVELSYRYARAHTKMWK 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,148,534
Number of Sequences: 27780
Number of extensions: 260818
Number of successful extensions: 663
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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