Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_C01
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 27 0.11
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 27 0.14
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 27 0.14
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 27 0.14
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 27 0.14
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 26 0.19
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 5.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 5.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 5.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 5.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 9.4
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.1 bits (57), Expect = 0.11
Identities = 11/55 (20%), Positives = 25/55 (45%)
Frame = +2
Query: 242 EFYIVKGENHEMVITGTTLKNYNNKMWKDVDINKQVPAGPRIFAANHLATNVSSW 406
E I+ +++ + KNYN K++ ++ +Q+P ++ N + W
Sbjct: 311 ESKIISSLSNKTIHNNNNYKNYNKKLYYNIINIEQIPVPVPVYCGNFPPRPMGPW 365
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.14
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVPAGPRIFAANHLATNVSSW 406
NYN K++ +++ +Q+P ++ N L + W
Sbjct: 103 NYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGPW 137
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.14
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVPAGPRIFAANHLATNVSSW 406
NYN K++ +++ +Q+P ++ N L + W
Sbjct: 103 NYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGPW 137
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.14
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVPAGPRIFAANHLATNVSSW 406
NYN K++ +++ +Q+P ++ N L + W
Sbjct: 103 NYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGPW 137
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.14
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVPAGPRIFAANHLATNVSSW 406
NYN K++ +++ +Q+P ++ N L + W
Sbjct: 103 NYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGPW 137
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 26.2 bits (55), Expect = 0.19
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 358 PSWYLFIYIDIFPHFVIIILQSRTSDNHFMILPFNNIKLILARN 227
P+W FI I ++I+L++ H +P NNI LIL +N
Sbjct: 49 PTWLSFIRI-----VLVILLRAGYVLIHIGSVPVNNINLILLQN 87
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVP 352
NYN K++ +++ +Q+P
Sbjct: 101 NYNKKLYYNINYIEQIP 117
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVP 352
NYN K++ +++ +Q+P
Sbjct: 101 NYNKKLYYNINYIEQIP 117
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVP 352
NYN K++ +++ +Q+P
Sbjct: 103 NYNKKLYYNINYIEQIP 119
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +2
Query: 302 NYNNKMWKDVDINKQVP 352
NYN K++ +++ +Q+P
Sbjct: 339 NYNKKLYYNINYIEQIP 355
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 20.6 bits (41), Expect = 9.4
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 40 NCE*DVR*YYTHQEIIRLSQCSWTIFVNDSHIKAIQVELPFNIKAHGID 186
+CE +V + ++ + SWT +K ++ E N+ A GID
Sbjct: 157 SCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLKHMKQEAGSNLVAKGID 205
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,513
Number of Sequences: 438
Number of extensions: 3680
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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