Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_B24
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro...    30   2.3  
AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA...    30   2.3  
AE014297-4188|AAF56753.2|  397|Drosophila melanogaster CG5540-PA...    29   4.1  
Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei...    29   5.4  
AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro...    29   5.4  
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA...    29   5.4  

>BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p
           protein.
          Length = 1169

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 257 VVLYTVLLDSYSKTIILMCVGTLTSCCIHLCY 162
           + L+ V LDS S   ++MC+G       H+CY
Sbjct: 749 MALWDVNLDSISMINLIMCIGFSVDFTAHICY 780


>AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA
           protein.
          Length = 1169

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 257 VVLYTVLLDSYSKTIILMCVGTLTSCCIHLCY 162
           + L+ V LDS S   ++MC+G       H+CY
Sbjct: 749 MALWDVNLDSISMINLIMCIGFSVDFTAHICY 780


>AE014297-4188|AAF56753.2|  397|Drosophila melanogaster CG5540-PA
           protein.
          Length = 397

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = -3

Query: 150 FKVLITNLCPSSNIKAKIVLSE*NRDNTTLKKSRE 46
           FKVL  NL  S   KAK +LSE ++  TTLK+  E
Sbjct: 93  FKVLFFNLYISGFYKAKKLLSEMDKRCTTLKERVE 127


>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
           SA protein.
          Length = 1116

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 223 EYESSNTVYNTTITLKFHRIRFSSYCLNDEQIY 321
           E  + + +YN TITLK   I +SS+ LN  +++
Sbjct: 702 ETPNEDDIYNITITLKVLSILYSSHNLNPWELF 734


>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
           protein.
          Length = 1127

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 223 EYESSNTVYNTTITLKFHRIRFSSYCLNDEQIY 321
           E  + + +YN TITLK   I +SS+ LN  +++
Sbjct: 713 ETPNEDDIYNITITLKVLSILYSSHNLNPWELF 745


>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
           protein.
          Length = 1127

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 223 EYESSNTVYNTTITLKFHRIRFSSYCLNDEQIY 321
           E  + + +YN TITLK   I +SS+ LN  +++
Sbjct: 713 ETPNEDDIYNITITLKVLSILYSSHNLNPWELF 745


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,481,315
Number of Sequences: 53049
Number of extensions: 496287
Number of successful extensions: 993
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)