Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_B24
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.88 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   4.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 141 LITNLCPSSNIKAKIVLSE*NRDNTTLKKSREPSCSPLM 25
           L+ + CPS+ ++ ++ +++  +     KKS  PS  PL+
Sbjct: 852 LVLSGCPSNMMELQVDIADSQQPLNLSKKSPSPSPRPLV 890


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 252 YYYHTKISSNSVQ*LLPE*RTNLFYYNYRFSLFIVDIMSTCSWGLLQ 392
           Y YHT ++  S    LP    N+F     F   +     T S  LL+
Sbjct: 176 YIYHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLK 222


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 252 YYYHTKISSNSVQ*LLPE*RTNLFYYNYRFSLFIVDIMSTCSWGLLQ 392
           Y YHT ++  S    LP    N+F     F   +     T S  LL+
Sbjct: 191 YIYHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLK 237


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 252 YYYHTKISSNSVQ*LLPE*RTNLFYYNYRFSLFIVDIMSTCSWGLLQ 392
           Y YHT ++  S    LP    N+F     F   +     T S  LL+
Sbjct: 79  YIYHTLVAEQSYGLTLPSWTNNIFPKGELFDATVFTYNITNSTPLLK 125


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 56  FFSVVLSLFHSLKTILAFMLLLGH 127
           +F  + S+F  +  ++  MLL+GH
Sbjct: 236 YFLNMASVFMRIFNLICMMLLIGH 259


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 242 VLLDSYSKTIILMCVGTLTSCC 177
           +L DS+    IL+C  ++ S C
Sbjct: 109 MLCDSWVSLDILLCTASILSLC 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,286
Number of Sequences: 438
Number of extensions: 3722
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)