Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B23
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46937-7|CAH10806.1| 109|Caenorhabditis elegans Hypothetical pr... 30 0.57
AC024200-17|AAF36002.2| 432|Caenorhabditis elegans Hypothetical... 29 0.99
Z54271-3|CAA91039.1| 713|Caenorhabditis elegans Hypothetical pr... 29 1.3
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 28 3.0
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 26 9.2
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 26 9.2
U80029-10|AAB37589.1| 460|Caenorhabditis elegans Hypothetical p... 26 9.2
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 26 9.2
>Z46937-7|CAH10806.1| 109|Caenorhabditis elegans Hypothetical
protein F43C1.7 protein.
Length = 109
Score = 30.3 bits (65), Expect = 0.57
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +2
Query: 119 PKELIESCFTL--KKSFK-VEVETFCKHYTMKEKVEKIEG 229
P+EL+E C L K S + V++E +YT+KE ++K++G
Sbjct: 63 PEELLEECCQLVKKNSIQGVKMEKVEVNYTLKENLKKVKG 102
>AC024200-17|AAF36002.2| 432|Caenorhabditis elegans Hypothetical
protein Y71F9AL.1 protein.
Length = 432
Score = 29.5 bits (63), Expect = 0.99
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 125 ELIESCFTLKKSFKVEVETFCKHYTMKEKVEKIEGF-SYLPL-EGPVKLKNPDITLSYLE 298
E+IE L++SF + + + + +E+I+ F +P + P+ LK+P L +E
Sbjct: 89 EIIEKFDKLEESFAIRFFAIGRKKKL-DSIERIKAFLDVVPFNKAPICLKSPKNELFLVE 147
Query: 299 YYGADPNNVPEKPY 340
Y + P+K Y
Sbjct: 148 EYENPSDEAPKKVY 161
>Z54271-3|CAA91039.1| 713|Caenorhabditis elegans Hypothetical
protein F21D5.3 protein.
Length = 713
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 152 KKSFKVEVETFCKHYTMKEKVEKIEGFSYLPLE 250
KKS++++VET K++ +++ + GF Y+ E
Sbjct: 356 KKSYRIQVETVQKYFFDWKEIPIVYGFGYIEYE 388
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 155 KSFKVEVETFCKHYTMKEKVEKIEGFSYL 241
K+ K+ + F KEK E+IEG +YL
Sbjct: 477 KNVKIALTRFSDFMNHKEKTEEIEGINYL 505
>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
protein K02A2.3 protein.
Length = 1020
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +2
Query: 89 SNNISDCHICPKEL-IESCFTLKKS---FKVEVETFCKHYTMKE 208
+ + C++C K L +ES F + E + FC HYT K+
Sbjct: 287 NETVDFCNLCDKSLYLESVFCANVNNDEASAEDDVFCTHYTSKK 330
>Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical
protein K10H10.10 protein.
Length = 321
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 116 CPKELIESCFTLKKSFKVEVETFCKHY 196
C L+ + FT K+FK++ +CK +
Sbjct: 191 CQNSLLTNVFTNVKNFKIDFSIYCKKH 217
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 155 KSFKVEVETFCKHYTMKEKVEKIEGFSYLPLEGPVKLKNPDITLSYLEYYGADP 316
KSFK + F MKE V+ + ++ ++ K N T L+YY P
Sbjct: 29 KSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATTIELQYYRVYP 82
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 155 KSFKVEVETFCKHYTMKEKVEKIEGFSYLPLEGPVKLKNPDITLSYLEYYGADP 316
KSFK + F MKE V+ + ++ ++ K N T L+YY P
Sbjct: 29 KSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATTIELQYYRVYP 82
>U80029-10|AAB37589.1| 460|Caenorhabditis elegans Hypothetical
protein T20D4.8 protein.
Length = 460
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 210 FSFIV*CLQNVSTSTLKDFFNVKHDSINSLGHM 112
FSF++ L+NV+ + F+N H +I L +
Sbjct: 119 FSFVMETLENVNVTLTNIFYNYLHANIEVLNQL 151
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 155 KSFKVEVETFCKHYTMKEKVEKIEGFSYLPLEGPVKLKNPDITLSYLEYYGADP 316
KSFK + F MKE V+ + ++ ++ K N T L+YY P
Sbjct: 29 KSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATTIELQYYRVYP 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,345,482
Number of Sequences: 27780
Number of extensions: 179100
Number of successful extensions: 524
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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