Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_B23
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   2.4  
DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse tr...    22   2.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.4  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    20   9.5  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    20   9.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   9.5  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    20   9.5  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    20   9.5  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 41  KTALKNTCGRWLSDNS 88
           K  L N CG+W S  S
Sbjct: 360 KLMLPNCCGKWSSQKS 375


>DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 42

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 146 TLKKSFKVEVETFCKHYTMKEKVEKIEGF 232
           +LKK F    + +C H+ +  K  K   F
Sbjct: 9   SLKKDFGTYFQQYCLHHKILIKKNKCNAF 37


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 183 NVSTSTLKDFFNVKHDSINSLG 118
           N STS+  D  ++  D +NSLG
Sbjct: 215 NDSTSSKTDDDSIDFDRMNSLG 236


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 183 NVSTSTLKDFFNVKHDSINSLG 118
           N STS+  D  ++  D +NSLG
Sbjct: 253 NDSTSSKTDDDSIDFDRMNSLG 274


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 107 NKLYYNINYI 116


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 293 LEYYGADPNNVPEKPYDVFIGR 358
           +EYY   P   P+  Y++ + R
Sbjct: 190 VEYYSCCPEPYPDITYEIRLRR 211


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 340 NKLYYNINYI 349


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 107 NHLYYSMNYL 78
           N LYY++NY+
Sbjct: 340 NKLYYNINYI 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,775
Number of Sequences: 438
Number of extensions: 2152
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)