Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B22
(440 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61156-1|CAA43469.1| 285|Homo sapiens laminin-binding protein p... 46 6e-05
X15005-1|CAA33112.1| 300|Homo sapiens protein ( Human mRNA for ... 46 6e-05
U43901-1|AAC50652.1| 295|Homo sapiens 37 kD laminin receptor pr... 46 6e-05
U36484-1|AAC50313.1| 125|Homo sapiens laminin-binding protein p... 46 6e-05
S37431-1|AAB22299.1| 295|Homo sapiens 67 kda laminin receptor p... 46 6e-05
M14199-1|AAA36165.1| 135|Homo sapiens protein ( Human laminin r... 46 6e-05
J03799-1|AAA36161.1| 295|Homo sapiens protein ( Human colin car... 46 6e-05
BT007219-1|AAP35883.1| 295|Homo sapiens laminin receptor 1 (rib... 46 6e-05
BC107567-1|AAI07568.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC073863-1|AAH73863.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC071971-1|AAH71971.1| 295|Homo sapiens ribosomal protein SA ps... 46 6e-05
BC071970-1|AAH71970.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC071969-1|AAH71969.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC071968-1|AAH71968.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC071693-1|AAH71693.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC070263-1|AAH70263.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC068062-1|AAH68062.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC066941-1|AAH66941.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC062714-1|AAH62714.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC053370-1|AAH53370.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC050688-1|AAH50688.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC034537-1|AAH34537.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC013827-1|AAH13827.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC010418-1|AAH10418.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC008867-1|AAH08867.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
BC005391-1|AAH05391.1| 295|Homo sapiens ribosomal protein SA pr... 46 6e-05
AF503367-1|AAM33304.1| 295|Homo sapiens multidrug resistance-as... 46 6e-05
AF284768-1|AAK69721.1| 295|Homo sapiens laminin receptor-like p... 46 6e-05
AF063593-1|AAG43152.1| 74|Homo sapiens brain my035 protein pro... 31 2.3
AY971131-1|AAY18552.1| 130|Homo sapiens immunoglobulin alpha he... 29 7.1
Y13787-1|CAA74113.1| 113|Homo sapiens immunoglobulin heavy chai... 29 9.4
U80735-1|AAB91434.1| 744|Homo sapiens CAGF28 protein. 29 9.4
BC101397-1|AAI01398.1| 416|Homo sapiens ring finger protein 180... 29 9.4
BC101279-1|AAI01280.1| 96|Homo sapiens RNF180 protein protein. 29 9.4
BC101278-1|AAI01279.1| 416|Homo sapiens ring finger protein 180... 29 9.4
BC101277-1|AAI01278.1| 416|Homo sapiens ring finger protein 180... 29 9.4
BC048318-1|AAH48318.1| 360|Homo sapiens DnaJ-like protein protein. 29 9.4
AM080143-1|CAL04289.1| 101|Homo sapiens immunoglobulin heavy ch... 29 9.4
AL135787-11|CAC22154.1| 360|Homo sapiens novel protein containi... 29 9.4
AK090756-1|BAC03514.1| 416|Homo sapiens protein ( Homo sapiens ... 29 9.4
AF471554-1|AAQ05729.1| 119|Homo sapiens Ig heavy chain variable... 29 9.4
AC093726-1|AAP21865.1| 698|Homo sapiens unknown protein. 29 9.4
AB209084-1|BAD92321.1| 1011|Homo sapiens Sulfonylurea receptor 1... 29 9.4
>X61156-1|CAA43469.1| 285|Homo sapiens laminin-binding protein
protein.
Length = 285
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 169 AREVLRMRGTISREHPWEVMPDLYFYRD 196
>X15005-1|CAA33112.1| 300|Homo sapiens protein ( Human mRNA for
potential laminin-binding protein (nem/1cHD4). ).
Length = 300
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 184 AREVLRMRGTISREHPWEVMPDLYFYRD 211
>U43901-1|AAC50652.1| 295|Homo sapiens 37 kD laminin receptor
precursor/p40 ribosome associated protein protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>U36484-1|AAC50313.1| 125|Homo sapiens laminin-binding protein
protein.
Length = 125
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 95 AREVLRMRGTISREHPWEVMPDLYFYRD 122
>S37431-1|AAB22299.1| 295|Homo sapiens 67 kda laminin receptor
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>M14199-1|AAA36165.1| 135|Homo sapiens protein ( Human laminin
receptor (2H5 epitope) mRNA, 5' end. ).
Length = 135
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 19 AREVLRMRGTISREHPWEVMPDLYFYRD 46
>J03799-1|AAA36161.1| 295|Homo sapiens protein ( Human colin
carcinoma laminin-binding protein mRNA, complete cds. ).
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BT007219-1|AAP35883.1| 295|Homo sapiens laminin receptor 1
(ribosomal protein SA, 67kDa) protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC107567-1|AAI07568.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC073863-1|AAH73863.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC071971-1|AAH71971.1| 295|Homo sapiens ribosomal protein SA
pseudogene protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC071970-1|AAH71970.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC071969-1|AAH71969.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC071968-1|AAH71968.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC071693-1|AAH71693.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC070263-1|AAH70263.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC068062-1|AAH68062.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC066941-1|AAH66941.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC062714-1|AAH62714.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC053370-1|AAH53370.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC050688-1|AAH50688.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC034537-1|AAH34537.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC013827-1|AAH13827.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC010418-1|AAH10418.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC008867-1|AAH08867.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>BC005391-1|AAH05391.1| 295|Homo sapiens ribosomal protein SA
protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>AF503367-1|AAM33304.1| 295|Homo sapiens multidrug
resistance-associated protein MGr1-Ag protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>AF284768-1|AAK69721.1| 295|Homo sapiens laminin receptor-like
protein LAMRL5 protein.
Length = 295
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 10 AREVLRLRGVLSRDQRWDVVVDLFFYRD 93
AREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRD 206
>AF063593-1|AAG43152.1| 74|Homo sapiens brain my035 protein
protein.
Length = 74
Score = 30.7 bits (66), Expect = 2.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 285 PVFLCWGCTKCSRSSGCRCCIFS 217
P CW + S+GC+CC++S
Sbjct: 20 PAHSCWTARAITCSTGCQCCVYS 42
>AY971131-1|AAY18552.1| 130|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 130
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 283 WASQVQDEWSTANAPAPCRCSVMGRFCPRLDRRVNVIYLRLN 408
W S++ ++ ST N SV GRF D N +YL++N
Sbjct: 47 WVSRINEDGSTTNYAD----SVKGRFTISRDNAKNTLYLQMN 84
>Y13787-1|CAA74113.1| 113|Homo sapiens immunoglobulin heavy chain
variable and joining regions protein.
Length = 113
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 280 DWASQVQDEWSTANAPAPCRCSVMGRFCPRLDRRVNVIYLRLNI 411
+W S V D +T C SV GRF D N IYL+++I
Sbjct: 46 EWVSIVTDHGNTK-----CADSVKGRFTISRDNSKNTIYLQMHI 84
>U80735-1|AAB91434.1| 744|Homo sapiens CAGF28 protein.
Length = 744
Score = 28.7 bits (61), Expect = 9.4
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = -2
Query: 250 QEQRVPVLHLQP--MMQLVQHSQ----SIPHELAAALPLWERRQPVP*LVALP-SHSLQG 92
Q+Q+ PVLHLQP +MQL Q Q P+ P +++Q P H L G
Sbjct: 209 QQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQPPPSPQQHQLFG 268
Query: 91 HD 86
HD
Sbjct: 269 HD 270
>BC101397-1|AAI01398.1| 416|Homo sapiens ring finger protein 180
protein.
Length = 416
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 282 VFLCWGCTKCSRSSGC 235
+ CW C KC SSGC
Sbjct: 19 ILRCWKCRKCIASSGC 34
>BC101279-1|AAI01280.1| 96|Homo sapiens RNF180 protein protein.
Length = 96
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 282 VFLCWGCTKCSRSSGC 235
+ CW C KC SSGC
Sbjct: 19 ILRCWKCRKCIASSGC 34
>BC101278-1|AAI01279.1| 416|Homo sapiens ring finger protein 180
protein.
Length = 416
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 282 VFLCWGCTKCSRSSGC 235
+ CW C KC SSGC
Sbjct: 19 ILRCWKCRKCIASSGC 34
>BC101277-1|AAI01278.1| 416|Homo sapiens ring finger protein 180
protein.
Length = 416
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 282 VFLCWGCTKCSRSSGC 235
+ CW C KC SSGC
Sbjct: 19 ILRCWKCRKCIASSGC 34
>BC048318-1|AAH48318.1| 360|Homo sapiens DnaJ-like protein protein.
Length = 360
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +2
Query: 107 RRKSNKLRNRLSSLPKWKRRRQFMRN 184
+ + +L+ +L++ P+WKR R++M+N
Sbjct: 324 QEQEEELKKKLANDPRWKRYRRWMKN 349
>AM080143-1|CAL04289.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 280 DWASQVQDEWSTANAPAPCRCSVMGRFCPRLDRRVNVIYLRLN 408
+W S ++ + S + A SVMGRF D N +YL++N
Sbjct: 49 EWVSLIKGDGSNKYSAA----SVMGRFTISRDNSKNTVYLQMN 87
>AL135787-11|CAC22154.1| 360|Homo sapiens novel protein containing
a DnaJ domain protein.
Length = 360
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +2
Query: 107 RRKSNKLRNRLSSLPKWKRRRQFMRN 184
+ + +L+ +L++ P+WKR R++M+N
Sbjct: 324 QEQEEELKKKLANDPRWKRYRRWMKN 349
>AK090756-1|BAC03514.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ33437 fis, clone BRACE2021541, weakly similar to
PROTEIN-TYROSINE PHOSPHATASE YVH1 (EC 3.1.3.48). ).
Length = 416
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 282 VFLCWGCTKCSRSSGC 235
+ CW C KC SSGC
Sbjct: 19 ILRCWKCRKCIASSGC 34
>AF471554-1|AAQ05729.1| 119|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 119
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 283 WASQVQDEWSTANAPAPCRCSVMGRFCPRLDRRVNVIYLRLN 408
W S++ ++ S AN SV GRF D N +YL++N
Sbjct: 47 WVSRINEDGSGANYVG----SVQGRFTISRDNAKNTLYLQMN 84
>AC093726-1|AAP21865.1| 698|Homo sapiens unknown protein.
Length = 698
Score = 28.7 bits (61), Expect = 9.4
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = -2
Query: 250 QEQRVPVLHLQP--MMQLVQHSQ----SIPHELAAALPLWERRQPVP*LVALP-SHSLQG 92
Q+Q+ PVLHLQP +MQL Q Q P+ P +++Q P H L G
Sbjct: 163 QQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQPPPSPQQHQLFG 222
Query: 91 HD 86
HD
Sbjct: 223 HD 224
>AB209084-1|BAD92321.1| 1011|Homo sapiens Sulfonylurea receptor 1
variant protein.
Length = 1011
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 288 QSGSRRMEHC*RACPLPLLRHGEVLPKTGPP 380
Q +RRM C C L HGE P T PP
Sbjct: 947 QLRARRMTTCRPCCTSVLRSHGEPAPSTCPP 977
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,603,402
Number of Sequences: 237096
Number of extensions: 1078472
Number of successful extensions: 16811
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 16470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16811
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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