Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B18
(448 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 32 0.22
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 30 0.67
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 30 0.67
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 30 0.67
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 30 0.67
U40414-5|AAA81408.2| 339|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 3.6
U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical pr... 28 3.6
AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase p... 28 3.6
Z81097-9|CAB03174.2| 183|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z70210-7|CAA94153.1| 142|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical pr... 27 8.2
U97002-8|AAB52265.2| 166|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 27 8.2
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 239 ITFANTNMPQEALYCQFLFD*RQTLKLQQYPLCFPGNEWSAVNT----YVSLYIVSEAY 403
+T A N PQ + CQFL K P+ F +W A N Y+S++++ +Y
Sbjct: 215 LTSAKLNKPQNYIMCQFLL--IIASKFINIPIFFFNRDWFAFNEGLDGYISIFLIQVSY 271
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 30.3 bits (65), Expect = 0.67
Identities = 17/77 (22%), Positives = 33/77 (42%)
Frame = -1
Query: 238 RKRITIPRTDKKIRNICLLNSKKNVSRLTTMIKDKCVKISQRTDGGKWLVEENLIGRWPI 59
R R+T R D+ I + + + + +I + + + L + L GR P+
Sbjct: 34 RPRVTTHRMDRNILRSAREDPHRTATDIQMIISSPNEPVPSKRTVRRRLQQAGLHGRKPV 93
Query: 58 KKTRLTDSTKKKRLQWA 8
KK ++ + R+ WA
Sbjct: 94 KKPFISKKNRMARVAWA 110
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 30.3 bits (65), Expect = 0.67
Identities = 17/77 (22%), Positives = 33/77 (42%)
Frame = -1
Query: 238 RKRITIPRTDKKIRNICLLNSKKNVSRLTTMIKDKCVKISQRTDGGKWLVEENLIGRWPI 59
R R+T R D+ I + + + + +I + + + L + L GR P+
Sbjct: 63 RPRVTTHRMDRNILRSAREDPHRTATDIQMIISSPNEPVPSKRTVRRRLQQAGLHGRKPV 122
Query: 58 KKTRLTDSTKKKRLQWA 8
KK ++ + R+ WA
Sbjct: 123 KKPFISKKNRMARVAWA 139
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 30.3 bits (65), Expect = 0.67
Identities = 17/77 (22%), Positives = 33/77 (42%)
Frame = -1
Query: 238 RKRITIPRTDKKIRNICLLNSKKNVSRLTTMIKDKCVKISQRTDGGKWLVEENLIGRWPI 59
R R+T R D+ I + + + + +I + + + L + L GR P+
Sbjct: 63 RPRVTTHRMDRNILRSAREDPHRTATDIQMIISSPNEPVPSKRTVRRRLQQAGLHGRKPV 122
Query: 58 KKTRLTDSTKKKRLQWA 8
KK ++ + R+ WA
Sbjct: 123 KKPFISKKNRMARVAWA 139
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 30.3 bits (65), Expect = 0.67
Identities = 17/77 (22%), Positives = 33/77 (42%)
Frame = -1
Query: 238 RKRITIPRTDKKIRNICLLNSKKNVSRLTTMIKDKCVKISQRTDGGKWLVEENLIGRWPI 59
R R+T R D+ I + + + + +I + + + L + L GR P+
Sbjct: 63 RPRVTTHRMDRNILRSAREDPHRTATDIQMIISSPNEPVPSKRTVRRRLQQAGLHGRKPV 122
Query: 58 KKTRLTDSTKKKRLQWA 8
KK ++ + R+ WA
Sbjct: 123 KKPFISKKNRMARVAWA 139
>U40414-5|AAA81408.2| 339|Caenorhabditis elegans Hypothetical
protein F53B3.5 protein.
Length = 339
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 225 VILFLSHLPTRICLRKLYI 281
+ILFL HLPT+ C R +Y+
Sbjct: 312 LILFLFHLPTKNCCRFVYV 330
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 171 FLLFKRQMFLIFLSVRGMVILFLSHLPTRICLRKLYIVNFYSIDDK 308
FLLF++ +F V MV+LF + + +RK I Y D++
Sbjct: 473 FLLFQQLGVSVFSGVAVMVLLFPINFVITMIIRKWQIAQMYYKDER 518
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 171 FLLFKRQMFLIFLSVRGMVILFLSHLPTRICLRKLYIVNFYSIDDK 308
FLLF++ +F V MV+LF + + +RK I Y D++
Sbjct: 473 FLLFQQLGVSVFSGVAVMVLLFPINFVITMIIRKWQIAQMYYKDER 518
>U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical
protein F22D3.6 protein.
Length = 639
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2
Query: 336 HSGYCWSFKVCRQSNKN*QYKAS*GIFVLANVIGKGSPYLVPIKKSGTSAS*IVKRTFL 160
H G ++ C+ SN++ QYK V N I +GSPY +K+G S +++ ++
Sbjct: 146 HIGRVYTILRCKCSNEH-QYKC-----VAKNEIREGSPYSEIYRKAGKQFSSVIESEYV 198
>AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase
protein.
Length = 639
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2
Query: 336 HSGYCWSFKVCRQSNKN*QYKAS*GIFVLANVIGKGSPYLVPIKKSGTSAS*IVKRTFL 160
H G ++ C+ SN++ QYK V N I +GSPY +K+G S +++ ++
Sbjct: 146 HIGRVYTILRCKCSNEH-QYKC-----VAKNEIREGSPYSEIYRKAGKQFSSVIESEYV 198
>Z81097-9|CAB03174.2| 183|Caenorhabditis elegans Hypothetical
protein K07A1.1 protein.
Length = 183
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +3
Query: 123 IFTHLSFIIVVKRETFFLLFKRQMFLIFLSVRGMVILFLSHLPTRICLRKLYIVNFYSID 302
I ++F+ V +E +LL + ++L+F V +I F++ LP R+ + + S+D
Sbjct: 76 IVIEVAFLSVYGKEHVWLLRVQMIYLVFQLVFSTLITFIAFLPDASGTRQDFSLIIPSLD 135
>Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical
protein F53C11.2 protein.
Length = 693
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 104 SVRPLRNLYTLV--FYHRSQTRNVLFTI*EADVPDFFIGTRYGDPFPITFANTNM 262
SV P ++Y L F H R+V++ + VP FFIG G F TF T +
Sbjct: 476 SVTPPVSIYQLGENFSHHELFRSVVYEMPWTRVPSFFIGIFVG-YFLATFTKTRL 529
>Z70210-7|CAA94153.1| 142|Caenorhabditis elegans Hypothetical
protein K08H2.7 protein.
Length = 142
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 60 IGHRPMRFSSTNHFPPSVLCEIFTHLSFIIVVK 158
+G +R + +N P +LC+ +SF+ VVK
Sbjct: 68 VGFNLVRITPSNFTPTGILCQCSDQVSFLPVVK 100
>Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical
protein R07B5.8b protein.
Length = 583
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 203 FFIGTRYGDPFPITFANTNMPQEALYCQFLF 295
F + T YG PFP F N ++ C+F F
Sbjct: 176 FIMKTWYGSPFPAEFINV---KKLFICEFCF 203
>Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical
protein R07B5.8a protein.
Length = 568
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 203 FFIGTRYGDPFPITFANTNMPQEALYCQFLF 295
F + T YG PFP F N ++ C+F F
Sbjct: 221 FIMKTWYGSPFPAEFINV---KKLFICEFCF 248
>U97002-8|AAB52265.2| 166|Caenorhabditis elegans Hypothetical
protein K09H11.6 protein.
Length = 166
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 111 VLCEIFTHLSFIIVVKRETFFLLFK-RQMFLIFLSVRGMVILFLS 242
++C + + + F+ VV R TF+ ++ F +F+ + G I+ +S
Sbjct: 99 IICILLSAIFFLYVVTRATFYSVWSDLGFFFVFVILTGFWIIAIS 143
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 408 FGYASETM*RDTYVFTALHSF 346
FGYASET+ +VF H F
Sbjct: 266 FGYASETIAYGAFVFITYHGF 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,095,190
Number of Sequences: 27780
Number of extensions: 238798
Number of successful extensions: 614
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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