Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B13
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 153 1e-37
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 151 4e-37
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 147 5e-36
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 146 9e-36
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 137 6e-33
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 122 1e-28
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 119 1e-27
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 81 7e-16
08_02_1528 + 27666356-27667081 31 0.55
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 29 2.2
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 3.0
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 3.9
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 28 3.9
11_06_0284 + 21909758-21913645 28 5.2
08_02_1109 + 24364464-24364710,24366572-24366638,24366639-243667... 28 5.2
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 27 6.8
04_01_0275 + 3648866-3649951 27 6.8
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 6.8
03_05_0615 + 26137785-26138593,26139307-26141368 27 9.0
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 27 9.0
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 153 bits (370), Expect = 1e-37
Identities = 79/133 (59%), Positives = 99/133 (74%), Gaps = 4/133 (3%)
Frame = +3
Query: 126 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 299
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 300 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASN 473
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 474 PESKVFYLKMTGD 512
PESKVFYLKM GD
Sbjct: 340 PESKVFYLKMKGD 352
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 151 bits (365), Expect = 4e-37
Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 4/133 (3%)
Frame = +3
Query: 126 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 299
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 300 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASN 473
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 474 PESKVFYLKMTGD 512
PESKVFYLKM GD
Sbjct: 122 PESKVFYLKMKGD 134
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 147 bits (356), Expect = 5e-36
Identities = 76/128 (59%), Positives = 96/128 (75%), Gaps = 4/128 (3%)
Frame = +3
Query: 141 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 314
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 315 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKV 488
WR++SSIEQK E G+E + KEYR K+E EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 489 FYLKMTGD 512
FYLKM GD
Sbjct: 121 FYLKMKGD 128
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 146 bits (354), Expect = 9e-36
Identities = 78/132 (59%), Positives = 95/132 (71%), Gaps = 4/132 (3%)
Frame = +3
Query: 129 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 302
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 303 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNP 476
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 477 ESKVFYLKMTGD 512
ESKVFYLKM GD
Sbjct: 122 ESKVFYLKMKGD 133
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 137 bits (331), Expect = 6e-33
Identities = 72/129 (55%), Positives = 92/129 (71%), Gaps = 7/129 (5%)
Frame = +3
Query: 147 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 311
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 312 SWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESK 485
SWR++SSIEQK E G+ A+ YR +VE EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 486 VFYLKMTGD 512
VFYLKM GD
Sbjct: 130 VFYLKMKGD 138
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 122 bits (295), Expect = 1e-28
Identities = 57/123 (46%), Positives = 83/123 (67%)
Frame = +3
Query: 144 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 323
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 324 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKM 503
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 504 TGD 512
GD
Sbjct: 123 KGD 125
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 119 bits (287), Expect = 1e-27
Identities = 60/94 (63%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = +3
Query: 237 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 410
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 411 REICYDVLCLLDKHLIPKASNPESKVFYLKMTGD 512
IC +L LLD HL+P A ESKVFYLKM GD
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGD 111
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 80.6 bits (190), Expect = 7e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +3
Query: 204 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 377
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 378 KEYRVKVEKELREICYDVLCLLDK 449
EYR KVE E+ +IC DV+ ++DK
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK 84
>08_02_1528 + 27666356-27667081
Length = 241
Score = 31.1 bits (67), Expect = 0.55
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +3
Query: 114 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 293
QY T V K+ K A + + + E E + + +LLS K +
Sbjct: 124 QYFIRLTKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKI 180
Query: 294 VGARRSSWRVISSIEQKTE-GSERKQQMAKEYRV 392
+ S W ++S QKT + +Q A E+ +
Sbjct: 181 TTSNSSKWSLVSKAFQKTRLACQEEQLQALEFAI 214
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 206 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 316
G E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 361 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 266
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 141 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 302
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 303 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 395
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 259 KETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENNRWQ 378
+E PLL+++++ GHH E F + ++PK + W+
Sbjct: 36 REKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/88 (22%), Positives = 41/88 (46%)
Frame = +3
Query: 153 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 332
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 333 IEQKTEGSERKQQMAKEYRVKVEKELRE 416
E+K +G R+++ +E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>08_02_1109 +
24364464-24364710,24366572-24366638,24366639-24366746,
24367200-24367332,24368096-24368167,24368754-24368886,
24369310-24369470
Length = 306
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 2 HRCRHCSISFAAREKPKKFCNLLVNYRFTLPTRASVKSISSIVHDVRR 145
H CRH +A E PK F NY+F P +S+S I+ V++
Sbjct: 71 HGCRHIGKEISAGESPKVFGYRERNYQF--PGFFFDRSVSCILRAVQK 116
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 405 ELREICYDVLCLLDKHLIPKASNPES--KVFYLKMT 506
+LRE+ YD+ LD+ L+ A+ P S K+F + +T
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLT 106
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 306 RSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 434
R SW +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 19 RRSWMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 177 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR---RSSWRVISSIEQKT 347
A AE ++ A KE+ +E+ + + A +++V + +SS R I ++++
Sbjct: 129 ARYAEVVQELDQAKKELLRLRLEVRSAAE-AKAKAERDIVASACTIQSSLRAIDEMKRRV 187
Query: 348 EGSERKQQMAKEYRVKVEKELREI 419
+ + + + + R++ E+E REI
Sbjct: 188 DEANEEHVLVELARIEAERERREI 211
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 168 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 320
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 375 AKEYRVKVEKELREICYDVLC-LLDKHLIPKASN 473
AK +K + +R I D LC DKHL+PK +N
Sbjct: 352 AKNRYIKYIRNIRAI-QDYLCNRADKHLVPKINN 384
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,789,427
Number of Sequences: 37544
Number of extensions: 268303
Number of successful extensions: 856
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -