Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_B13
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...   215   1e-56
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   215   1e-56
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   207   3e-54
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   206   1e-53
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr...    33   0.12 
AF039713-2|AAB96726.2|  476|Caenorhabditis elegans Hypothetical ...    30   1.1  
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    29   1.5  
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical...    29   1.5  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL032630-13|CAA21568.1|  348|Caenorhabditis elegans Hypothetical...    29   2.6  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    29   2.6  
Z47357-2|CAD54175.1|  464|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    27   8.0  
AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine re...    27   8.0  

>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score =  215 bits (526), Expect = 1e-56
 Identities = 109/126 (86%), Positives = 113/126 (89%)
 Frame = +3

Query: 135 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 314
           MS  KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60

Query: 315 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFY 494
           WRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK LIPKA   ESKVFY
Sbjct: 61  WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120

Query: 495 LKMTGD 512
           LKM GD
Sbjct: 121 LKMKGD 126


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  215 bits (526), Expect = 1e-56
 Identities = 109/126 (86%), Positives = 113/126 (89%)
 Frame = +3

Query: 135 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 314
           MS  KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60

Query: 315 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFY 494
           WRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK LIPKA   ESKVFY
Sbjct: 61  WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120

Query: 495 LKMTGD 512
           LKM GD
Sbjct: 121 LKMKGD 126


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  207 bits (506), Expect = 3e-54
 Identities = 106/126 (84%), Positives = 112/126 (88%)
 Frame = +3

Query: 135 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 314
           MS   EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60

Query: 315 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFY 494
           WRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI KA   ESKVFY
Sbjct: 61  WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFY 120

Query: 495 LKMTGD 512
           LKM GD
Sbjct: 121 LKMKGD 126


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  206 bits (502), Expect = 1e-53
 Identities = 105/126 (83%), Positives = 111/126 (88%)
 Frame = +3

Query: 135 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 314
           MS   EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60

Query: 315 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFY 494
           WRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI KA   ESK FY
Sbjct: 61  WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKAFY 120

Query: 495 LKMTGD 512
           LKM GD
Sbjct: 121 LKMKGD 126


>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
           protein F20D12.2 protein.
          Length = 1116

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
 Frame = +3

Query: 120 LPSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVE-LSNEERNLLSVAYKNV 293
           LP      ++E++ V+R K  E A R   +   M  V +  +  ++NEE     +  K +
Sbjct: 679 LPMQASMENREKMEVERLKRLELATREKLIQKLMTGVIDQVIHGIANEETMKAKIVRKQM 738

Query: 294 VG---ARR-SSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 416
           +    AR+    +V    E+K +  E+++ +AKE  +KVEKE+ E
Sbjct: 739 LAIENARKLKEEQVRLENEKKLKRIEQEKNIAKELVLKVEKEISE 783


>AF039713-2|AAB96726.2|  476|Caenorhabditis elegans Hypothetical
           protein F57B10.9 protein.
          Length = 476

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
 Frame = +3

Query: 123 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN--VV 296
           P+ T+++     ++R +L E+           KE  E   ELS EE+N +S    N  + 
Sbjct: 206 PNMTVAILLSSDIER-RLIEELHIVLREFTDFKEQAEPSTELSKEEKNRISTTISNFLIK 264

Query: 297 GARRSSW-------RVISSIEQKTE 350
           G ++ +W       RVIS +E   E
Sbjct: 265 GGQKIAWGVETTTVRVISRVEDNGE 289


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
            protein Y39B6A.30 protein.
          Length = 1408

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 21/88 (23%), Positives = 39/88 (44%)
 Frame = +3

Query: 144  DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 323
            + E+L+   K  E  +  ++   A +E  +   E    E   + V  K  V A     +V
Sbjct: 895  ENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE-KEKVKAEEEKVKV 953

Query: 324  ISSIEQKTEGSERKQQMAKEYRVKVEKE 407
                 ++   +E ++  A+E +VK+EKE
Sbjct: 954  EKERNKEKVKAEEERLKAEEEKVKIEKE 981


>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
            protein Y111B2A.14 protein.
          Length = 1481

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 23/83 (27%), Positives = 44/83 (53%)
 Frame = +3

Query: 171  KLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE 350
            K  EQ +   + A  +K++ E   +L  E+      A K+ + A++   R+    ++K E
Sbjct: 954  KALEQRKAKKEEAERLKKLEE---KLKKEKEKQ---AEKDRIEAKKFEERMKKE-QEKQE 1006

Query: 351  GSERKQQMAKEYRVKVEKELREI 419
              ERK++  +E + + E+E+REI
Sbjct: 1007 EKERKEREKREEKERKEREIREI 1029


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
 Frame = +3

Query: 147 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 326
           K  LVQR + A   E+  + + A ++V         E R+    A K   G    +  + 
Sbjct: 683 KTLLVQRLQTALDTEKAAEASVAARDV---------EMRDAAENAVKQEGGEENPAAFIA 733

Query: 327 SSIEQ---KTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHL-IPK 464
            SIE+   KTE   +K+    E R K E++L +   +    L+KH  +PK
Sbjct: 734 PSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREALEKHYQLPK 783


>AL032630-13|CAA21568.1|  348|Caenorhabditis elegans Hypothetical
           protein Y62H9A.13 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +3

Query: 231 ETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVE 401
           +  VELSN+  N   + Y   V +  ++    +S E+KT  +E +  +  EY VK E
Sbjct: 97  DVDVELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDNI--EYGVKTE 151


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
 Frame = +3

Query: 147 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 326
           K  LVQR + A   E+  + + A ++V         E R+    A K   G    +  + 
Sbjct: 683 KTLLVQRLQTALDTEKAAEASVAARDV---------EMRDAAENAVKQEGGEENPAAFIA 733

Query: 327 SSIEQ---KTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHL-IPK 464
            SIE+   KTE   +K+    E R K E++L +   +    L+KH  +PK
Sbjct: 734 PSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREALEKHYQLPK 783


>Z47357-2|CAD54175.1|  464|Caenorhabditis elegans Hypothetical
           protein ZK1128.2b protein.
          Length = 464

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 285 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 383
           KNV+GAR+ +W+ I+     T+G E+  ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = +3

Query: 144  DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 323
            D+E++ ++ +LA      ++      E  ETG ++ N E +   +  K  +   R + R 
Sbjct: 3947 DEEKVERKRELATDDAPMEEAEMGDGEENETGQQMENAEISDRQMVGKGTIEEARQTKR- 4005

Query: 324  ISSIEQKTEGSERKQQMAKE 383
                E+K E  +RK++  K+
Sbjct: 4006 ----EEKREEEKRKRRELKD 4021


>AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine
           receptor, class j protein50 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 410 ELLFYFNPIFFCHLLFSFRPF 348
           ++++YF P  FC L F   PF
Sbjct: 4   DIIYYFTPRVFCALTFLVNPF 24


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,822,871
Number of Sequences: 27780
Number of extensions: 233048
Number of successful extensions: 761
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)