Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B12
(484 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 28 0.64
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 27 1.1
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.5
SPBC725.02 |mpr1|spy1|response regulator phosphotransferase |Sch... 27 2.0
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 27 2.0
SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces... 25 4.5
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 25 4.5
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 6.0
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 25 7.9
SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr 1|||M... 25 7.9
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 28.3 bits (60), Expect = 0.64
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 342 LTIKTE*ADRKCSICFIPGTTTRNMKIYPPSRKMRRTLKRMYR 470
L IKT R+ I TTT ++ + P SRK RR LK+ R
Sbjct: 536 LAIKTR-EKRRHKINATGMTTTNSVPLRPKSRKARRALKKKAR 577
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 27.5 bits (58), Expect = 1.1
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 248 RLESLPSLAKGVEDNSRYKTLEANVTMLKLLVDDKDGVSRSEVFDMLHSRDDNPEHEDLP 427
RLE + +AKG + + +TL+ V+ L+ LV D + + F + D++P L
Sbjct: 334 RLEEVMEIAKGKSNLAYLRTLQTVVSSLRKLVADLKTILENRGFSV---SDNSPLSLALN 390
Query: 428 TFPED 442
+ ED
Sbjct: 391 QYMED 395
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 27.1 bits (57), Expect = 1.5
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +2
Query: 89 SFRRLVFHPQCDRIPDESRTEATMGHYQVLWFIITAYLGLKSCRGQTSPDTTMRLESLPS 268
S R H R+PDES + T G Y+ + + KS R S T RL+
Sbjct: 114 SKRNAANHASHHRMPDESASYRTRGEYE----SSSPRVPQKSLRRYYSTRTAQRLD---- 165
Query: 269 LAKGVEDNSRY-KTLEANVTMLKLLVDDKDGVSRSEVFDMLHSRDDNPE 412
+ + +SRY KT + + VDD D ++ + D +P+
Sbjct: 166 VRRPASRSSRYSKTSDLPPSDPGRFVDDSDLTPHTDFTNRFVDSDFDPD 214
>SPBC725.02 |mpr1|spy1|response regulator phosphotransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 2.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 338 LVDDKDGVSRSEVFDMLHSRDDNPEHE 418
L+ DK + S VFD L DD+ EHE
Sbjct: 159 LIQDKQLIDHS-VFDQLLEMDDDDEHE 184
>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 2.0
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -2
Query: 102 KRRND*FALF-FTCYDHTRDVR 40
K+RN FAL CY+HT D+R
Sbjct: 181 KKRNSGFALAPIACYNHTSDLR 202
>SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 235
Score = 25.4 bits (53), Expect = 4.5
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 143 RTEATMGHYQVLWFIITAYLGL 208
R++ +GH+ V+W ++ LGL
Sbjct: 130 RSKKALGHFPVVWGVVCRALGL 151
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 4.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 218 RGQTSPDTTMRLESLPSLAKGVEDNSRYKTLEANVTMLK 334
RG SP M+ SLP L G+E + + T + V + K
Sbjct: 379 RGSDSPKEVMKDLSLPVLVLGIESDGLF-TFDEQVEIAK 416
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 25.0 bits (52), Expect = 6.0
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 332 KLLVDDKDGVSRSEVFDMLHSRDDNPEHEDLPTFPEDAEDAKADVPASPDS 484
K ++ G+S+ +F S + NP DL T E + A +P+S
Sbjct: 1260 KHIISGAKGISKMGMFR--RSLEKNPSRSDLTTTQEASSSASVPPAIAPES 1308
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 302 KTLEANVTMLKLLVDDKDGVSRSE 373
KT E V++ KLL+DD++ +S E
Sbjct: 570 KTPEGLVSISKLLLDDREHLSHDE 593
>SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 24.6 bits (51), Expect = 7.9
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 317 NVTMLKLLVDDKDGVSRSEVFDMLHSRDDNPEHEDLPTFPEDAEDAKADVPAS 475
N+ L L+ K+ S+S LHS PEH + T P +++ S
Sbjct: 107 NMGFLSLVFHTKETNSKSST---LHSNPYCPEHHSIRTLPSAVTATTSNISTS 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,884,331
Number of Sequences: 5004
Number of extensions: 36998
Number of successful extensions: 123
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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