Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B12
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical... 31 0.44
AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical... 31 0.44
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical ... 30 1.0
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 28 3.1
AL117206-5|CAB60448.2| 345|Caenorhabditis elegans Hypothetical ... 28 3.1
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 28 4.1
U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical p... 27 5.4
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 27 9.4
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 27 9.4
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 27 9.4
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 27 9.4
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 27 9.4
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical
protein Y51A2D.7b protein.
Length = 1057
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 329 LKLLVDDKDGVSRSEVFDMLHSRDDNP---EHEDLPTFPEDAEDAKAD 463
+K +V+D D ++ +F++L NP E E+LP F E E +AD
Sbjct: 375 IKQIVEDVDPITHGIIFELLVELVYNPAVFEGENLPEFRESNEKIRAD 422
>AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical
protein Y51A2D.7a protein.
Length = 989
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 329 LKLLVDDKDGVSRSEVFDMLHSRDDNP---EHEDLPTFPEDAEDAKAD 463
+K +V+D D ++ +F++L NP E E+LP F E E +AD
Sbjct: 375 IKQIVEDVDPITHGIIFELLVELVYNPAVFEGENLPEFRESNEKIRAD 422
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 30.7 bits (66), Expect = 0.58
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 176 KPGSGPL*LQSWTRQGSGRTEGGTLNAETISSHCFSLVMITRVMCARARVDACSLCP 6
K G G +Q G+GR GG + T C+S ++ + +C A + SLCP
Sbjct: 694 KDGDGSRLVQCSNPGGNGRVSGGCPDGYT----CYSSPLLDQNVCCGASTELQSLCP 746
>AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical
protein F33D11.2 protein.
Length = 408
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 167 YQVLWFIITAYLGLKSCRGQTSPDTTMR-LESLPSLAKGVEDNSRYKTLEANVTMLKLLV 343
Y WF I + G KS +T P+T + L P+ V +N++ +T+ + ++ +
Sbjct: 44 YGAFWFTIWEHGGNKSPDSRTEPETAITPLPPSPAPVTPVLENAKPRTIRKQKSTAEIEL 103
Query: 344 DDK 352
D K
Sbjct: 104 DSK 106
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 341 VDDKDGVSRSEVFDMLHSRDDNPEHEDLPTFPEDAEDAKADVPASPD 481
VDD D + EV + ++ PEHE + +D ED +P D
Sbjct: 506 VDDGDADVKQEVVEKDGKAEEAPEHEAMDV-EDDDEDLDETIPLESD 551
>AL117206-5|CAB60448.2| 345|Caenorhabditis elegans Hypothetical
protein Y67A10A.7 protein.
Length = 345
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 186 LLPLI*VLSHVGAKHHQIRQCDLRVYRVLQRGLKTIADTKPWRRT 320
LLPL+ VLS+ A + Q +R +R+ R ++ + D+K W R+
Sbjct: 87 LLPLLTVLSNATA--YPSNQLLMREFRLTNRVVEMLPDSKHWPRS 129
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +2
Query: 335 LLVDDK-DG-VSRSEVFDMLHSRDDNPEHEDL 424
+L D K DG + ++VF++L S D+NP++ D+
Sbjct: 15 MLFDKKGDGKIDAAQVFEVLRSLDENPKNSDV 46
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKAD 463
D P+ + +PT ED +D+KAD
Sbjct: 267 DQKPDLKQIPTSEEDTDDSKAD 288
>U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical
protein F37C12.13a protein.
Length = 434
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 371 EVFDMLHSRDDNPEHEDLPTFPEDAEDAKADVP--ASPDS 484
EV D+L DD+ E E++ T +E DVP +PD+
Sbjct: 382 EVNDLLDGLDDDDEEEEVQTMTLGSETVLNDVPMEEAPDA 421
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 401 DNPEHEDLPTFPEDAEDAKADV 466
+ E +DLPTF ED ++A+ V
Sbjct: 324 EEEEDDDLPTFSEDMDEARQQV 345
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 26.6 bits (56), Expect = 9.4
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 191 TAYLGLKSCRGQTSPDTTMRLESLPSLAKGVEDN---SRYKTLEANVTMLKLLVDDK 352
TAY LK+ + T + E A+ +D SR+KTLEA+ KL + K
Sbjct: 814 TAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQK 870
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 DDNPEHEDLPTFPEDAEDAKADVPASP 478
DDN + D T E+ +D A+ PA+P
Sbjct: 326 DDNMDFLDFVTAKEEPKDEPAETPAAP 352
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 26.6 bits (56), Expect = 9.4
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 191 TAYLGLKSCRGQTSPDTTMRLESLPSLAKGVEDN---SRYKTLEANVTMLKLLVDDK 352
TAY LK+ + T + E A+ +D SR+KTLEA+ KL + K
Sbjct: 814 TAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQK 870
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,741,441
Number of Sequences: 27780
Number of extensions: 221509
Number of successful extensions: 602
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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