Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B06
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 206 1e-53
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 29 1.5
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 29 1.5
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 29 1.5
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 29 1.5
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 29 1.5
Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical p... 29 1.5
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 29 1.5
AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical... 29 1.5
AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRN... 29 1.5
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53336-5|AAO21380.1| 271|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53336-4|AAA96177.2| 290|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 6.1
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical p... 27 6.1
Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical p... 27 6.1
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 27 8.0
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 27 8.0
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 206 bits (502), Expect = 1e-53
Identities = 95/174 (54%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Frame = +3
Query: 9 FGRTSTNEQTEIAQRLFLKLRDNGFISSQSVDQLLCTNCDRFLADRFVEGTCPFPGCGYE 188
FGRT+T+ QTEI Q +FLKL NG+ SSQSVDQL C C++FLADRFV GTCP C Y+
Sbjct: 125 FGRTTTDHQTEICQDMFLKLHKNGYTSSQSVDQLYCNQCEKFLADRFVTGTCPM--CAYD 182
Query: 189 DARGDQCDKCGKLINAIELIRPRCKVCGHSPTVKPSEQLFLELGQLEPS----IRTWIST 356
DARGDQCD CGKLINA++L +C +C +P VK S +FL L +L+ + ++
Sbjct: 183 DARGDQCDGCGKLINAVDLKDAKCHMCKATPEVKQSTHIFLSLDKLQQKTTEHLDRELAK 242
Query: 357 VEGGWSPPARAVTRAWLREQLRPRAVTRDLKWGVPVPLPEYSNKVFYVWFDAPI 518
+ WS A +T+AW++ L PR +TRDLKWG VPL + KVFYVWFDAPI
Sbjct: 243 EDNRWSSNAVGITKAWMKLGLDPRCITRDLKWGTAVPLDGFEKKVFYVWFDAPI 296
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 337 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 381
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 374 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 418
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 374 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 418
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 282 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 326
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 337 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 381
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 374 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 418
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 374 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 418
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 282 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 326
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 204 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 248
>Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical
protein F25H5.1d protein.
Length = 258
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 8 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 52
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 102 DQLLCTNCDRFLA-DRFV-EGTCPFPGCGYEDARGDQCDKCGKLI 230
D C CD+ L R++ P+ YED +QCD+C K I
Sbjct: 374 DHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPI 418
>AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical
protein Y105E8A.20 protein.
Length = 406
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +3
Query: 297 EQLFLELGQLEPSIRTWISTVEGGWSPP---ARAVTRAWLREQLRPRAVTRDLKWGVPVP 467
E L + + WI+ P + A+T + E L L WG+PVP
Sbjct: 58 ENYMFRLSEFREKVAEWINRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVP 117
Query: 468 LPEYSNKVFYVWFDA 512
+ YVW DA
Sbjct: 118 --NDPTQTIYVWLDA 130
>AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRNA
synthetase (mitochondrial)protein.
Length = 500
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +3
Query: 297 EQLFLELGQLEPSIRTWISTVEGGWSPP---ARAVTRAWLREQLRPRAVTRDLKWGVPVP 467
E L + + WI+ P + A+T + E L L WG+PVP
Sbjct: 152 ENYMFRLSEFREKVAEWINRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVP 211
Query: 468 LPEYSNKVFYVWFDA 512
+ YVW DA
Sbjct: 212 --NDPTQTIYVWLDA 224
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 3 TGFGRTSTNEQTEIAQRLFLKLRDNGFI 86
T F RT+ E Q ++K++DNG+I
Sbjct: 76 TNFIRTTDPAHLEAVQHFWMKIQDNGYI 103
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 57 FLKLRDNGFISSQSVDQLLCT--NCDRFLADRFVEGTCPFPGCGYEDARGDQCDKCGKLI 230
FL D+G + + +C+ +C D + + F CG RGD CD GK I
Sbjct: 106 FLWRVDDGTPCQAATSRAVCSKGSCQIVGCDGLISSSFRFDACGVCGGRGDTCDN-GKFI 164
>U53336-5|AAO21380.1| 271|Caenorhabditis elegans Hypothetical
protein K07C11.7b protein.
Length = 271
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 171 PGCGYEDARGDQCDKCGKLINAIELIRPRCKVCGH 275
P GY D GD+ C L+ +E I+P + GH
Sbjct: 195 PPLGYLDQFGDERWGCRDLLKTVERIQPAYHIFGH 229
>U53336-4|AAA96177.2| 290|Caenorhabditis elegans Hypothetical
protein K07C11.7a protein.
Length = 290
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 171 PGCGYEDARGDQCDKCGKLINAIELIRPRCKVCGH 275
P GY D GD+ C L+ +E I+P + GH
Sbjct: 214 PPLGYLDQFGDERWGCRDLLKTVERIQPAYHIFGH 248
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 117 TNCDRFLADRFVEGTCPFPGCGYE---DARGDQCDKCG 221
T CDR D V G C GC ++ R D+C CG
Sbjct: 725 TPCDRNGDDICVAGACMPAGCDHQLHSTLRRDKCGVCG 762
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 117 TNCDRFLADRFVEGTCPFPGCGYE---DARGDQCDKCG 221
T CDR D V G C GC ++ R D+C CG
Sbjct: 725 TPCDRNGDDICVAGACMPAGCDHQLHSTLRRDKCGVCG 762
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 207 CDKCGKLINAIELIRPRCKVCGHSPTVKPSEQLFLELGQLEPSIRTW 347
C+ C + + PR VCGH+ E+L + G P RTW
Sbjct: 199 CEICAHQFSHSDEYVPRVLVCGHTLCTSCIEKLDVGDGIRCPFCRTW 245
>Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 157 PSTNLSAKNLSQLVHNNWSTDWELMNPL 74
P+T + K + HNN T+W+LM L
Sbjct: 49 PNTRFACKAELAIDHNNLKTEWDLMTLL 76
>Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 157 PSTNLSAKNLSQLVHNNWSTDWELMNPL 74
P+T + K + HNN T+W+LM L
Sbjct: 49 PNTRFACKAELAIDHNNLKTEWDLMTLL 76
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 117 TNCDRFLADRFVEGTCPFPGCGYEDARGDQCDKCGK 224
T CD D V+G C GC + + DKCGK
Sbjct: 180 TKCDSKSNDICVDGECLPVGCDGKLGSSLKFDKCGK 215
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 117 TNCDRFLADRFVEGTCPFPGCGYEDARGDQCDKCGK 224
T CD D V+G C GC + + DKCGK
Sbjct: 180 TKCDSKSNDICVDGECLPVGCDGKLGSSLKFDKCGK 215
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 117 TNCDRFLADRFVEGTCPFPGCGYEDARGDQCDKCGK 224
T CD D V+G C GC + + DKCGK
Sbjct: 180 TKCDSKSNDICVDGECLPVGCDGKLGSSLKFDKCGK 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,163,226
Number of Sequences: 27780
Number of extensions: 269337
Number of successful extensions: 861
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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