Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_B06
         (519 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.6  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 24  TNEQTEIAQRLFLKLRDNGFISSQSVDQLLC 116
           +NE   +A    L   +  F +++S+++LLC
Sbjct: 80  SNEVVAVALGALLSKGEESFPTARSLEKLLC 110


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 132 FLADRFVEGTCPFPGCGYEDARGDQ 206
           F+A  F+  T  FPG   ED++ ++
Sbjct: 8   FIAAWFIACTHSFPGAHDEDSKEER 32


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 132 FLADRFVEGTCPFPGCGYEDARGDQ 206
           F+A  F+  T  FPG   ED++ ++
Sbjct: 8   FIAAWFIACTHSFPGAHDEDSKEER 32


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 132 FLADRFVEGTCPFPGCGYEDARGDQ 206
           F+A  F+  T  FPG   ED++ ++
Sbjct: 8   FIAAWFIACTHSFPGAHDEDSKEER 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,598
Number of Sequences: 438
Number of extensions: 3457
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)