Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_B04
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z54342-16|CAA91156.1| 755|Caenorhabditis elegans Hypothetical p... 28 2.6
Z47072-4|CAA87370.1| 755|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 4.5
U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine rece... 27 4.5
Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 195 YRADRALETFAKKQNAQFNLTEDVEQFDWKRYSNITDE 308
++A +TF+K++N + + ED++Q D + S + DE
Sbjct: 243 FQAANKHQTFSKQENVEDTIFEDMDQSDNQEKSELLDE 280
>Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical
protein C44B9.1 protein.
Length = 954
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 225 AKKQNAQFNLTEDVEQFDWKRYSNITDEQLHSQLCDGTQRLLEHRSLM-LDVPGYKVQLE 401
A K+ A NL+E +E+F W+R + + L DG + E R+LM LD ++LE
Sbjct: 812 AIKETAPVNLSEAMEKFFWERAIYYSFKALVQGYGDGGKCSTEGRALMQLDFQMILMKLE 871
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 177 LNALSAYRADRALETFAKKQNAQFNLTEDVEQFDW 281
L L++++A + + +F K N QFN+ +DV W
Sbjct: 134 LRHLNSFQATQDVISFIKYANVQFNMDQDVRWVVW 168
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 177 LNALSAYRADRALETFAKKQNAQFNLTEDVEQFDW 281
L L++++A + + +F K N QFN+ +DV W
Sbjct: 134 LRHLNSFQATQDVISFIKYANVQFNMDQDVRWVVW 168
>Z54342-16|CAA91156.1| 755|Caenorhabditis elegans Hypothetical
protein F26C11.1 protein.
Length = 755
Score = 28.3 bits (60), Expect = 2.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 352 SSSL*VPSHNCECNCSSVILLYRFQSNCSTSSVRLNCAFCFFANVSSARSARYALNAFKH 173
SSSL + ++ N SSV LYR SN + S V C A + + FK
Sbjct: 663 SSSLTIEYYSNPGNQSSVKFLYRDNSNDNFSDVTSQIPVCNGAQYCAMSDFQNIAYQFKP 722
Query: 172 FPGPRVCVQVKMRRIARLLPSNVF 101
P + + I+ +L + ++
Sbjct: 723 LPDYMTLCETSLSSISSVLNNKIW 746
>Z47072-4|CAA87370.1| 755|Caenorhabditis elegans Hypothetical
protein F26C11.1 protein.
Length = 755
Score = 28.3 bits (60), Expect = 2.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 352 SSSL*VPSHNCECNCSSVILLYRFQSNCSTSSVRLNCAFCFFANVSSARSARYALNAFKH 173
SSSL + ++ N SSV LYR SN + S V C A + + FK
Sbjct: 663 SSSLTIEYYSNPGNQSSVKFLYRDNSNDNFSDVTSQIPVCNGAQYCAMSDFQNIAYQFKP 722
Query: 172 FPGPRVCVQVKMRRIARLLPSNVF 101
P + + I+ +L + ++
Sbjct: 723 LPDYMTLCETSLSSISSVLNNKIW 746
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 120 NLAIRRILTCTQTLGPGKCLN 182
N IRR+L T+ +GPGK LN
Sbjct: 1776 NEPIRRVLVETKIMGPGKSLN 1796
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 120 NLAIRRILTCTQTLGPGKCLN 182
N IRR+L T+ +GPGK LN
Sbjct: 1776 NEPIRRVLVETKIMGPGKSLN 1796
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 120 NLAIRRILTCTQTLGPGKCLN 182
N IRR+L T+ +GPGK LN
Sbjct: 1776 NEPIRRVLVETKIMGPGKSLN 1796
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 256 VRLNCAFCFFANVSSARSARYALNAFKH 173
+ L C F FF VS S R + +F+H
Sbjct: 736 ITLYCQFFFFGKVSEKLSTRLRIKSFQH 763
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 256 VRLNCAFCFFANVSSARSARYALNAFKH 173
+ L C F FF VS S R + +F+H
Sbjct: 736 ITLYCQFFFFGKVSEKLSTRLRIKSFQH 763
>U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine
receptor, class x protein2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 4.5
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = -1
Query: 180 SNIFPGRESVCRLRCVVLQGCYRVMYL 100
S++F R ++C+L C+++ C+ +MY+
Sbjct: 120 SDLFT-RTNICKLFCIIIPFCFFLMYM 145
>Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical
protein T13F2.7 protein.
Length = 663
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 225 AKKQNAQFNLTEDVEQFDWKRYSNITDEQLHSQLCDGTQRLLEHRSLM 368
+KKQ Q + E + Q +WK++ N E+ ++ D QR++ +++
Sbjct: 457 SKKQMRQARIVEGMSQEEWKKWRN---EKSSNRKADIKQRIMARGAII 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,180,686
Number of Sequences: 27780
Number of extensions: 204694
Number of successful extensions: 669
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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