Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_A18
         (272 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   0.91 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   1.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   2.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   4.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   8.4  

>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 0.91
 Identities = 20/71 (28%), Positives = 25/71 (35%)
 Frame = +2

Query: 56  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 235
           E S    + C+  +  S  S RS     Q     HS    S  E G   R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRD 256

Query: 236 SMLSCRKHDQR 268
                +K D+R
Sbjct: 257 RSREYKKKDRR 267


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -2

Query: 241 HTVLTAASSFLEPNHFSTF-NWRGLTMRMSTAKCLKFRFRTPR 116
           + V +A  SF  P     F  WR     +ST K +   FRT +
Sbjct: 247 YVVYSALGSFYIPMLVMLFFYWRIYNAAVSTTKAINQGFRTTK 289


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 231 RTVCSHVENMIKGV 272
           R VC  +EN I+G+
Sbjct: 477 RAVCGRIENTIQGL 490


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 239 YCPNSS*FFFRTEPFLH 189
           +CP S    F + PFL+
Sbjct: 382 HCPESDSILFVSSPFLN 398


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 45   NQKVKIPESLTVHVKSR 95
            N+K+ IP+  +V V SR
Sbjct: 1483 NEKLHIPKDKSVSVLSR 1499


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,384
Number of Sequences: 438
Number of extensions: 1346
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)