Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_A03
         (439 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid alpha-mann...    36   0.046
U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosida...    36   0.046
U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosida...    36   0.046
U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.      36   0.046
BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, cla...    36   0.046
AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, cla...    36   0.046

>U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid
           alpha-mannosidase protein.
          Length = 988

 Score = 36.3 bits (80), Expect = 0.046
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEP 439
           F +Y   +GDN   ++++SGAYIFRPN   P P
Sbjct: 618 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLP 648


>U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1010

 Score = 36.3 bits (80), Expect = 0.046
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEP 439
           F +Y   +GDN   ++++SGAYIFRPN   P P
Sbjct: 640 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLP 670


>U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1011

 Score = 36.3 bits (80), Expect = 0.046
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEP 439
           F +Y   +GDN   ++++SGAYIFRPN   P P
Sbjct: 641 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLP 671


>U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.
          Length = 987

 Score = 36.3 bits (80), Expect = 0.046
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEP 439
           F +Y   +GDN   ++++SGAYIFRPN   P P
Sbjct: 617 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLP 647


>BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, class
           2B, member 1 protein.
          Length = 1011

 Score = 36.3 bits (80), Expect = 0.046
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEP 439
           F +Y   +GDN   ++++SGAYIFRPN   P P
Sbjct: 641 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLP 671


>AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, class
           2B, member 1 precursor variant protein.
          Length = 1007

 Score = 36.3 bits (80), Expect = 0.046
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 341 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEP 439
           F +Y   +GDN   ++++SGAYIFRPN   P P
Sbjct: 637 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLP 667


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,050,118
Number of Sequences: 237096
Number of extensions: 961298
Number of successful extensions: 1931
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1931
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)