Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_A01
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    44   7e-07
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    41   5e-06
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   3.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   3.4  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   4.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   4.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   4.5  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   7.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.9  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 44.0 bits (99), Expect = 7e-07
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 13  WCIGVLLYEFLVGKPPFESEDQDTTHARIL-ALDMV-FPNYISEGAKDLISKLLR 171
           W +GVL++E L G PPF   D   T+  IL  +D + FP  I+  A  LI KL R
Sbjct: 549 WSLGVLMFELLTGTPPFTGGDPMKTYNIILKGIDAIEFPRSITRNATALIKKLCR 603


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 41.1 bits (92), Expect = 5e-06
 Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
 Frame = +1

Query: 13  WCIGVLLYEFLVGKPPFESEDQDTTHARILALDMVFP----NYISEGAKDLISKLL 168
           W  GV+LY  LVG PPF  EDQ   +A+I      +P    + ++  AK+LI+++L
Sbjct: 96  WACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPSPEWDTVTPEAKNLINQML 151


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 89  TQGYSP*TWCSRIIYLKELRI 151
           T G+S   +C R  YLKE  I
Sbjct: 84  TTGFSKECYCCRESYLKERHI 104


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 89  TQGYSP*TWCSRIIYLKELRI 151
           T G+S   +C R  YLKE  I
Sbjct: 84  TTGFSKECYCCRESYLKERHI 104


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 294 FSVFPFLIVIIIYV 335
           FSVF FLI++  Y+
Sbjct: 66  FSVFSFLILVSSYI 79


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 79  DTTHARILALDMVFPNYISEGAKDLISKLLRLFK*RKVVT*M 204
           DT + +  A+  ++PNY  + +    ++ L++ +   VVT M
Sbjct: 153 DTKYMKFPAIYEIYPNYFFDSSVIEEAQNLKMSRGSSVVTGM 194


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 79  DTTHARILALDMVFPNYISEGAKDLISKLLRLFK*RKVVT*M 204
           DT + +  A+  ++PNY  + +    ++ L++ +   VVT M
Sbjct: 153 DTKYMKFPAIYEIYPNYFFDSSVIEEAQNLKMSRGSSVVTGM 194


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 258 SCPFHSVNIRCNFSVFPFLIVIIIYVHKNLYYLPIL 365
           S P   V ++C+ S    ++ +I +V KNL  + IL
Sbjct: 53  SKPGKLVPLQCDLSNQNDILKVIEWVEKNLGAIDIL 88


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -1

Query: 251 INSYFETFVPSHVSSHIQVTTFLYLNSL 168
           I  YF    PS     I    FLY NSL
Sbjct: 3   IQKYFGKNFPSTSFILINYFIFLYFNSL 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,683
Number of Sequences: 438
Number of extensions: 2116
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)