Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_P24
         (543 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    24   1.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   3.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   6.1  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 191 DHFQLLQMGVGGHLGQ 144
           DH +++ M +GG LGQ
Sbjct: 225 DHLRIISMQMGGDLGQ 240


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 394 DELHKYIFRHICRSWIWSRLIIGRVSKLAPSF 299
           +++  Y FRHI    I +  +I   SK  P F
Sbjct: 368 EDISDYKFRHITEITILTVQLIVEFSKRLPGF 399


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 149 QGALPPPSEVVENGLKIVTEYKY 217
           QG     S  + N LK++ E+KY
Sbjct: 15  QGVTDIHSRNLTNSLKVIYEWKY 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,335
Number of Sequences: 438
Number of extensions: 3038
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)