Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P20
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 138 2e-33
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 51 5e-07
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 51 5e-07
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 50 1e-06
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 50 1e-06
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 44 5e-05
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 43 1e-04
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 38 0.003
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 38 0.003
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 35 0.025
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 34 0.057
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 33 0.075
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 33 0.100
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 33 0.100
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 32 0.23
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 31 0.30
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 31 0.40
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 31 0.40
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 30 0.70
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 29 1.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.6
AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 29 2.1
AC090999-9|AAK26153.1| 41|Caenorhabditis elegans Hypothetical ... 28 2.8
U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 27 6.5
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 27 6.5
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 27 6.5
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 27 6.5
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 138 bits (334), Expect = 2e-33
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +1
Query: 55 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 234
V VPRNFRLLEELE+GQKG GDG ISWGLE D DMTLT WT IIGPPRTPYE+R+Y+L+
Sbjct: 2 VDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQ 61
Query: 235 IECDTRYPDEPPTARFISRINMNCVNSAD 321
I+C YP EPPT RF ++++M VN ++
Sbjct: 62 IQCGGNYPREPPTVRFTTKVHMVGVNQSN 90
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GLVDNRQVPILARWQRDYTIKTVLQELRR-LMTLTENMKLSQPPEGS 460
G++D R + L W Y IKTVL+++R+ +M EN+KL QP EG+
Sbjct: 91 GVIDKRNLTTLRNWSNSYMIKTVLEDIRKNMMMAKENLKLQQPAEGA 137
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +1
Query: 55 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 234
+ P RL+ + ++ Q+ G G ++D++ LT W +I GP TP+E+ + L
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNI-LT-WEAIIFGPQETPFEDGTFKLS 56
Query: 235 IECDTRYPDEPPTARFISRI 294
+E YP++PPT +FIS++
Sbjct: 57 LEFTEEYPNKPPTVKFISKM 76
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +1
Query: 55 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 234
+ P RL+ + ++ Q+ G G ++D++ LT W +I GP TP+E+ + L
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNI-LT-WEAIIFGPQETPFEDGTFKLS 56
Query: 235 IECDTRYPDEPPTARFISRI 294
+E YP++PPT +FIS++
Sbjct: 57 LEFTEEYPNKPPTVKFISKM 76
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 163 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSADWTC 330
L HW I+GPP +PY+ ++ L I T YP +PP F +RI +NS C
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC 85
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 163 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSADWTC 330
L HW I+GPP +PY+ ++ L I T YP +PP F +RI +NS C
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC 85
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +1
Query: 118 DGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 294
DG S GL D+D + W ++IGPP T YE + ++ YP +PP +FIS I
Sbjct: 21 DG-FSAGLVDDND--IYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEI 76
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 163 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 294
LT G I GPP TPY M+ L I+ +YP PP +F ++I
Sbjct: 36 LTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKI 79
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 178 GMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSADWT 327
G+I G TPYE ++ L I+ YP + PT +FI++I V+ D T
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGT 432
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 172 WTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 294
WT I GPP+T Y+ + I + YP PP+ +F +++
Sbjct: 42 WTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKV 82
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 35.1 bits (77), Expect = 0.025
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 154 DMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPP 270
+ + W +IIG P+TPYE +Y K+ +P +PP
Sbjct: 34 ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPP 72
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 33.9 bits (74), Expect = 0.057
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 178 GMIIGPPRTPYENRMYSLKIECDTRYPDEPP 270
G I GP TPY + +K++ YP EPP
Sbjct: 55 GFIKGPEGTPYAGGTFEIKVDIPEHYPFEPP 85
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 33.5 bits (73), Expect = 0.075
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 181 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS 288
+I GP TPY N ++ I T YP PP F++
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLT 483
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 33.1 bits (72), Expect = 0.100
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 76 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 255
RL+ E ++ +G I+ ++ D+ W +I GP T + N ++ +I Y
Sbjct: 8 RLMTEYKELTTRPPEGIIAAPIDEDN---FFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 256 PDEPPTARF 282
P PP RF
Sbjct: 65 PLSPPKMRF 73
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 33.1 bits (72), Expect = 0.100
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 190 GPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSADWT 327
GP T YEN ++ ++++ +YP + P+ F+++I ++ A T
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGT 86
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 0.23
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 130 SWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKI 237
S G DD L HW I+GPP +PY+ ++ L I
Sbjct: 22 STGSVGDD---LYHWQATIMGPPESPYQGGIFFLTI 54
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 151 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 294
D+ ++ MI GP +P+ ++ L++ YP P RF+++I
Sbjct: 29 DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKI 76
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 31.1 bits (67), Expect = 0.40
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 115 GDGTISWGLESDDDMTLTH 171
GDGTI W LES D MT H
Sbjct: 485 GDGTIGWVLESMDKMTFPH 503
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 151 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 294
++ L WT ++I P + PY + + I YP +PP F ++I
Sbjct: 28 EETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKI 74
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +1
Query: 76 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 255
RL++EL Q + +G + + +D L W ++G T Y ++ L+ +Y
Sbjct: 8 RLMKELAQLKSEAPEGLLVDNTSTSND--LKQWKIGVVGAEGTLYAGEVFMLQFTFGPQY 65
Query: 256 PDEPPTARFI 285
P P F+
Sbjct: 66 PFNSPEVMFV 75
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 184 IIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNC 306
I GP TPYE ++ + + YP+ P +F + I NC
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLI-WNC 74
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +1
Query: 142 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSAD 321
+ D++ L G PR +N+++ KI+C + + + P F+ R C+ +
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACIEPSK 115
Query: 322 W 324
+
Sbjct: 116 Y 116
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +1
Query: 142 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSAD 321
+ D++ L G PR +N+++ KI+C + + + P F+ R C+ +
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACIEPSK 115
Query: 322 W 324
+
Sbjct: 116 Y 116
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +1
Query: 142 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSAD 321
+ D++ L G PR +N+++ KI+C + + + P F+ R C+ +
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACIEPSK 115
Query: 322 W 324
+
Sbjct: 116 Y 116
>AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical
protein Y48G9A.10 protein.
Length = 722
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 70 NFRLLEELEQGQKGVGDGTISWGLESDDDMTL 165
N +LLE +E Q + T WG+E+ D M++
Sbjct: 358 NKKLLEVIETSQYVISMDTAKWGVETSDKMSV 389
>AC090999-9|AAK26153.1| 41|Caenorhabditis elegans Hypothetical
protein Y82E9BR.5 protein.
Length = 41
Score = 28.3 bits (60), Expect = 2.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 391 NCLDSVITLPSCKDWNLPI 335
NCL I LP+C W+ P+
Sbjct: 7 NCLKICIQLPNCNTWSFPV 25
>U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical
protein F13H8.3 protein.
Length = 374
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 312 VDTVHIDSRNKTSCRWLIRITSITFNFKRIHSIFIRSPGGTNYHASPMSKSHVI 151
VD S NK WL + +N KR++ + IR+ ++ S + ++I
Sbjct: 317 VDRAFKTSSNKNDANWLSQTFVTEYNVKRVNEMLIRAVKLSDQSTSSKLQDNII 370
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 27.1 bits (57), Expect = 6.5
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +1
Query: 208 YENRMYSLKIECDTRYPDEPPTARFISRI 294
Y+N +++L ++ + YP +PP +F +
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNV 85
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 85 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 264
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 447 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 503
Query: 265 PPTARFI 285
F+
Sbjct: 504 SNLDNFL 510
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 85 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 264
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 630 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 686
Query: 265 PPTARFI 285
F+
Sbjct: 687 SNLDNFL 693
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 85 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 264
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 235 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 291
Query: 265 PPTARFI 285
F+
Sbjct: 292 SNLDNFL 298
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 85 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 264
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 576 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 632
Query: 265 PPTARFI 285
F+
Sbjct: 633 SNLDNFL 639
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 85 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 264
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 235 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 291
Query: 265 PPTARFI 285
F+
Sbjct: 292 SNLDNFL 298
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 85 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 264
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 630 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 686
Query: 265 PPTARFI 285
F+
Sbjct: 687 SNLDNFL 693
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 85 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 264
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 577 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 633
Query: 265 PPTARFI 285
F+
Sbjct: 634 SNLDNFL 640
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,076,597
Number of Sequences: 27780
Number of extensions: 190011
Number of successful extensions: 476
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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