Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_P19
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -2

Query: 562  PSHMRSALTQNSRCLHLNSLHPCLGSLTAVITNLKPFASVPQLSVTYLSVTKL 404
            P H  +  T  S+ + ++ + P L +   VIT  K    +P     Y   TK+
Sbjct: 1084 PPHDTTCTTLTSQTIRISWMSPPLSAANGVITGYKVIV-IPSGGGIYTKDTKI 1135


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 101 QCREEQVLLYGIAMQGPLSTTSVQEAGWRRAVVQE 205
           Q R+E  LLY I +      T ++ A W R  V E
Sbjct: 99  QLRKEVSLLYRILLGAKDYQTFLKTAAWARVHVNE 133


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 92  NPHQCREEQVLLYGIAMQGPLSTTSVQE 175
           +PHQ ++     YG A+Q P  T SVQ+
Sbjct: 20  HPHQHQQH----YGAAVQVPQQTQSVQQ 43


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 625  PPFSGQRAAVSSSDPSAQWSTP 560
            PP + +  A+SSS+    WS P
Sbjct: 1009 PPINLEARALSSSEILITWSPP 1030


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 625  PPFSGQRAAVSSSDPSAQWSTP 560
            PP + +  A+SSS+    WS P
Sbjct: 1005 PPINLEARALSSSEILITWSPP 1026


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 414 TLKYVTDNWGTDANGFKLVITAVKDPKHGCKEFR 515
           T+ Y      T    F  ++  V  PKH C E+R
Sbjct: 229 TVPYTETETETWTRVFNTLVDLV--PKHACAEYR 260


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 538  TQNSRCLHLNSLHPCLGSLTAVITNLKPF 452
            T +  C  +  +  C    TAV T  KP+
Sbjct: 1697 TDDKICFTMRPVVSCASGCTAVETKSKPY 1725


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,566
Number of Sequences: 438
Number of extensions: 3261
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)