Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P17
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 177 4e-45
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 172 2e-43
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 171 3e-43
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 137 5e-33
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 135 2e-32
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 131 3e-31
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 131 3e-31
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 131 3e-31
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 88 3e-18
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 88 3e-18
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 31 0.70
Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024801-8|AAK95893.1| 285|Caenorhabditis elegans Hypothetical ... 28 3.7
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 28 4.9
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 28 4.9
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 8.6
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 8.6
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 8.6
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 177 bits (431), Expect = 4e-45
Identities = 75/143 (52%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
Frame = +3
Query: 114 VPPEFLIKHPLQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQG 293
VPPE L +HPLQN W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+ L G
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWG 83
Query: 294 HDYAVFKHGIRPMWEDDANKMGGRWLISLEKKQRNSDLDRFWLDVVLLMIGENFENS*E- 470
DY +FK GI+PMWED N GGRWL+ ++K++R LD +WL++++ ++GE F+ +
Sbjct: 84 SDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDY 143
Query: 471 ICGAVVNVRAQLDKIGIWTADAS 539
ICGAVVNVR + DK+ +WT DA+
Sbjct: 144 ICGAVVNVRQKGDKVSLWTRDAT 166
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 172 bits (418), Expect = 2e-43
Identities = 75/145 (51%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Frame = +3
Query: 114 VPPEFLIKHPLQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQG 293
VPPE L +HPLQN W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+ L G
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWG 83
Query: 294 HDYAVFKHGIRPMWEDDANKMGGRWLISLEK--KQRNSDLDRFWLDVVLLMIGENFENS* 467
DY +FK GI+PMWED N GGRWL+ ++K ++R LD +WL++++ ++GE F+
Sbjct: 84 SDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQFDEYG 143
Query: 468 E-ICGAVVNVRAQLDKIGIWTADAS 539
+ ICGAVVNVR + DK+ +WT DA+
Sbjct: 144 DYICGAVVNVRQKGDKVSLWTRDAT 168
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 171 bits (416), Expect = 3e-43
Identities = 75/146 (51%), Positives = 103/146 (70%), Gaps = 4/146 (2%)
Frame = +3
Query: 114 VPPEFLIKHPLQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQG 293
VPPE L +HPLQN W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+ L G
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWG 83
Query: 294 HDYAVFKHGIRPMWEDDANKMGGRWLISLEK---KQRNSDLDRFWLDVVLLMIGENFENS 464
DY +FK GI+PMWED N GGRWL+ ++K ++R LD +WL++++ ++GE F+
Sbjct: 84 SDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEY 143
Query: 465 *E-ICGAVVNVRAQLDKIGIWTADAS 539
+ ICGAVVNVR + DK+ +WT DA+
Sbjct: 144 GDYICGAVVNVRQKGDKVSLWTRDAT 169
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 137 bits (331), Expect = 5e-33
Identities = 61/140 (43%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Frame = +3
Query: 132 IKHP---LQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDY 302
I HP L+ W+ W+ +++RNK+WEE L + TF +V +FW L+ IK PS L DY
Sbjct: 12 ISHPVYKLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDY 71
Query: 303 AVFKHGIRPMWEDDANKMGGRWLISLEKKQRNSDLDRFWLDVVLLMIGENFENS*E-ICG 479
VF+ GI PMWE N+ GGRWLI++EK + +D W ++++ MIGE F + E +CG
Sbjct: 72 NVFRDGIEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCG 131
Query: 480 AVVNVRAQLDKIGIWTADAS 539
V NVR + KI +WT +++
Sbjct: 132 IVCNVRGKGSKISVWTTNSA 151
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 135 bits (326), Expect = 2e-32
Identities = 58/135 (42%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
Frame = +3
Query: 138 HPLQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKH 317
+PL+ W+ W+ +++RNK+WE+ L ++ TF+TV +FW LY I+ PS L DY VF+
Sbjct: 12 YPLKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRD 71
Query: 318 GIRPMWEDDANKMGGRWLISLEKKQRNSDLDRFWLDVVLLMIGENFENS*E-ICGAVVNV 494
I+PMWE N GGRWLI ++K + +D WL++++ ++GE F E ICG V NV
Sbjct: 72 DIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNV 131
Query: 495 RAQLDKIGIWTADAS 539
R + KI +WT D +
Sbjct: 132 RGKGSKISVWTKDCN 146
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 131 bits (317), Expect = 3e-31
Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +3
Query: 138 HPLQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKH 317
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 318 GIRPMWEDDANKMGGRWLISLEKKQRNSDLDRFWLDVVLLMIGENFENS*E-ICGAVVNV 494
I+P WE N GGRWLI + K + LD WL+++L +IGE F E ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 495 RAQLDKIGIWTADAS 539
R Q KI +WT + +
Sbjct: 129 RGQGSKISVWTKNCN 143
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 131 bits (317), Expect = 3e-31
Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +3
Query: 138 HPLQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKH 317
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 48 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 107
Query: 318 GIRPMWEDDANKMGGRWLISLEKKQRNSDLDRFWLDVVLLMIGENFENS*E-ICGAVVNV 494
I+P WE N GGRWLI + K + LD WL+++L +IGE F E ICG V NV
Sbjct: 108 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 167
Query: 495 RAQLDKIGIWTADAS 539
R Q KI +WT + +
Sbjct: 168 RGQGSKISVWTKNCN 182
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 131 bits (317), Expect = 3e-31
Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +3
Query: 138 HPLQNTWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKH 317
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 318 GIRPMWEDDANKMGGRWLISLEKKQRNSDLDRFWLDVVLLMIGENFENS*E-ICGAVVNV 494
I+P WE N GGRWLI + K + LD WL+++L +IGE F E ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 495 RAQLDKIGIWTADAS 539
R Q KI +WT + +
Sbjct: 129 RGQGSKISVWTKNCN 143
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 88.2 bits (209), Expect = 3e-18
Identities = 41/102 (40%), Positives = 61/102 (59%)
Frame = +3
Query: 231 TVEDFWRLYHHIKLPSELRQGHDYAVFKHGIRPMWEDDANKMGGRWLISLEKKQRNSDLD 410
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLST---- 121
Query: 411 RFWLDVVLLMIGENFENS*EICGAVVNVRAQLDKIGIWTADA 536
R W ++++ +IGE F E+CGAV ++R Q D I +W +A
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNA 163
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 88.2 bits (209), Expect = 3e-18
Identities = 41/102 (40%), Positives = 61/102 (59%)
Frame = +3
Query: 231 TVEDFWRLYHHIKLPSELRQGHDYAVFKHGIRPMWEDDANKMGGRWLISLEKKQRNSDLD 410
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLST---- 121
Query: 411 RFWLDVVLLMIGENFENS*EICGAVVNVRAQLDKIGIWTADA 536
R W ++++ +IGE F E+CGAV ++R Q D I +W +A
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNA 163
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = -2
Query: 475 QISQEFSKFSPIIRRTTSNQKRSKSELRCFFSKLMSHLPPILFASSSHMGRIP 317
Q SQ S S + ++T +K SKS RC+F L L SSS R P
Sbjct: 4 QASQRSSSTSAVAQKTRERRK-SKSRRRCWFGCLWLSSRVSLIRSSSRFSRSP 55
>Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical
protein W01A8.7 protein.
Length = 266
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 285 RQGHDYAVFKHGIRPMWEDDANKMGGRWLISLEKKQRNSDLDRFWLDVV 431
+ GH Y K + WE + N G+W+ K++++ +D+FW++V+
Sbjct: 227 KAGH-YQHLKKILYKKWESENN---GKWI-----KRKSNQVDKFWIEVI 266
>AC024801-8|AAK95893.1| 285|Caenorhabditis elegans Hypothetical
protein Y50D7A.9 protein.
Length = 285
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = -2
Query: 535 ASAVQIPILSNCALTLTTAPQISQEFSKFSP-----IIRRTTSNQKRSKSELRCFFSKL 374
A + + L N + P++ F P I+ TSN+K +++LR +F+KL
Sbjct: 97 AQGLPLDTLKNFLQKMKDKPEVEYSFDIIGPSGIFLIVTAETSNKKAFENDLRKYFNKL 155
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 264 IKLPSELRQGHDYAVFKHGIRPMWEDDANKM 356
+ P E+ HDY + G+ P+W N++
Sbjct: 515 LTFPPEIAFNHDYGPYPFGVDPVWNLAINRL 545
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 264 IKLPSELRQGHDYAVFKHGIRPMWEDDANKM 356
+ P E+ HDY + G+ P+W N++
Sbjct: 515 LTFPPEIAFNHDYGPYPFGVDPVWNLAINRL 545
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 264 IKLPSELRQGHDYAVFKHGIRPMWEDDANKM 356
+ P E+ HDY + G+ P+W N++
Sbjct: 515 LTFPPEIAFNHDYGPYPFGVDPVWNLAINRL 545
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 264 IKLPSELRQGHDYAVFKHGIRPMWEDDANKMGGRWLISLEKKQR 395
+ +P E ++ VF+HG+ + D A W+I + K+ R
Sbjct: 295 LTIPCEEKEHLLEHVFEHGLIQLMPDGAKTFFDAWMIGVRKRMR 338
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 264 IKLPSELRQGHDYAVFKHGIRPMWEDDANKMGGRWLISLEKKQR 395
+ +P E ++ VF+HG+ + D A W+I + K+ R
Sbjct: 295 LTIPCEEKEHLLEHVFEHGLIQLMPDGAKTFFDAWMIGVRKRMR 338
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 240 DFWRLYHHIKLPSELRQGHDYAVFKHGIRPMWEDDANKMG---GRWLISLEKKQRNSDL 407
D WR + S + GHDY F G + +DA K G L+ KK +SD+
Sbjct: 218 DLWRFLQVDR--SRSKPGHDYGKFGTGNKQTLLEDARKKGIEPRDALLQFHKKWYSSDI 274
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 240 DFWRLYHHIKLPSELRQGHDYAVFKHGIRPMWEDDANKMG---GRWLISLEKKQRNSDL 407
D WR + S + GHDY F G + +DA K G L+ KK +SD+
Sbjct: 159 DLWRFLQVDR--SRSKPGHDYGKFGTGNKQTLLEDARKKGIEPRDALLQFHKKWYSSDI 215
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 240 DFWRLYHHIKLPSELRQGHDYAVFKHGIRPMWEDDANKMG---GRWLISLEKKQRNSDL 407
D WR + S + GHDY F G + +DA K G L+ KK +SD+
Sbjct: 218 DLWRFLQVDR--SRSKPGHDYGKFGTGNKQTLLEDARKKGIEPRDALLQFHKKWYSSDI 274
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 240 DFWRLYHHIKLPSELRQGHDYAVFKHGIRPMWEDDANKMG---GRWLISLEKKQRNSDL 407
D WR + S + GHDY F G + +DA K G L+ KK +SD+
Sbjct: 218 DLWRFLQVDR--SRSKPGHDYGKFGTGNKQTLLEDARKKGIEPRDALLQFHKKWYSSDI 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,043,237
Number of Sequences: 27780
Number of extensions: 273360
Number of successful extensions: 662
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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