Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P16
(482 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 29 2.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 2.3
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 28 3.1
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 28 3.1
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 27 5.4
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 27 7.1
U70854-10|AAB09155.1| 296|Caenorhabditis elegans Hypothetical p... 27 7.1
AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical... 27 7.1
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z73422-7|CAA97769.2| 603|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 27 9.4
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 27 9.4
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 27 9.4
AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical... 27 9.4
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 111 LYFYGKDKAPYVVTEDGVKKIL--GLPENPTYVRLIKPPFIVE-DGAVYAADDKVYII-Y 278
L+ ++ P ++ D + IL ++ R +K F+V+ DGA +ADD++ +I
Sbjct: 262 LFQIARNAQPSIIFIDEIDSILCERSEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGA 321
Query: 279 VNGTSETTDFILQEKP 326
N E D +L+ P
Sbjct: 322 TNRPHELDDAVLRRFP 337
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -3
Query: 189 SLVNLESF*RRLRLQHKVLYLY------HRSTGCSNNLKRFLARLSHPLI 58
++V SF + LR+QH+V Y + G NN L+RLSHP +
Sbjct: 75 AVVGKGSFSQVLRVQHRVTRKYFAVKVVNGDCGAVNNELNILSRLSHPFV 124
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 2.3
Identities = 29/110 (26%), Positives = 45/110 (40%)
Frame = +3
Query: 21 VYKVSDGGNKNEKLEDVKDAQEIVLDYSNNLYFYGKDKAPYVVTEDGVKKILGLPENPTY 200
V +VS GGN E + QEIV + +AP VV E ++ E P
Sbjct: 199 VTQVSQGGNYQAPPEH-QAVQEIVAE----------TEAPVVVAETEAPAVVET-EAPVV 246
Query: 201 VRLIKPPFIVEDGAVYAADDKVYIIYVNGTSETTDFILQEKPSAYAPEAT 350
+ + P +VE+ ++ + T D I++E+PS AT
Sbjct: 247 IEETEAPVVVEETPAPVVEETQAPVAAAKEESTYDDIVEEQPSTATETAT 296
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = -3
Query: 441 DSSSR*VIHPEL----FAVHCIRKSSCYNCSIV 355
D++ + HP+L VHC+R+S+CY+ V
Sbjct: 507 DNNGMLIYHPQLQIPKTEVHCVRRSACYDAQQV 539
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = -3
Query: 441 DSSSR*VIHPEL----FAVHCIRKSSCYNCSIV 355
D++ + HP+L VHC+R+S+CY+ V
Sbjct: 507 DNNGMLIYHPQLQIPKTEVHCVRRSACYDAQQV 539
>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = -3
Query: 441 DSSSR*VIHPEL----FAVHCIRKSSCYNCSIV 355
D++ + HP+L VHC+R+S+CY+ V
Sbjct: 507 DNNGMLIYHPQLQIPKTEVHCVRRSACYDAQQV 539
>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = -3
Query: 441 DSSSR*VIHPEL----FAVHCIRKSSCYNCSIV 355
D++ + HP+L VHC+R+S+CY+ V
Sbjct: 507 DNNGMLIYHPQLQIPKTEVHCVRRSACYDAQQV 539
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -1
Query: 395 IVFVNLLVITVVLYERGFRSVRT-RFLLKNKIGRLTCSVHVDDIDFVISRVYRSIFNDKW 219
+VF N +VI V +R RSV T +F+ + L + V + +Y + ND W
Sbjct: 35 VVFGNTMVIFAVAVDRKLRSVTTNKFIASLAVSDLLVGLIVMPLS-----LYYKMHNDHW 89
Query: 218 WLYQTYVSWIL 186
L T+ + L
Sbjct: 90 TLGYTWCQFHL 100
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +3
Query: 132 KAPYVVTEDGVKKILGLPENPTYVRLIKPPFIVEDGAVYAADDKVYIIYVNGTSETTDFI 311
+AP VV E ++ E P + + P +VE+ ++ + T D I
Sbjct: 285 EAPVVVAETEAPAVVET-EAPVVIEETEAPVVVEETPAPVVEETQAPVAAAKEESTYDDI 343
Query: 312 LQEKPSAYAPEAT 350
++E+PS AT
Sbjct: 344 VEEQPSTATETAT 356
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 27.1 bits (57), Expect = 7.1
Identities = 22/95 (23%), Positives = 38/95 (40%)
Frame = +3
Query: 24 YKVSDGGNKNEKLEDVKDAQEIVLDYSNNLYFYGKDKAPYVVTEDGVKKILGLPENPTYV 203
YKV++ NK E + +D L+ Y G + E + + P Y
Sbjct: 117 YKVANDKNKKEDFKFCRDVCSKALENLGTRYDSG-GHIWLIFLEYEMSYLKNSMNAPDYQ 175
Query: 204 RLIKPPFIVEDGAVYAADDKVYIIYVNGTSETTDF 308
RL F + + A++ D++ +YV T+F
Sbjct: 176 RLADQVFALFERALHCPTDQLEDVYVLAEQFCTEF 210
>U70854-10|AAB09155.1| 296|Caenorhabditis elegans Hypothetical
protein F38A5.11 protein.
Length = 296
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 225 IVEDGAVYAADDKVYIIYVNGTSETTDFILQEKPSAYAPEATLIQYYSY 371
I+E D K Y I+ T+ +TDF + P Y + + + + Y
Sbjct: 185 IIEGNQKIKVDPKQYNIFKKVTNNSTDFERFQPPKEYIVRSKIYELWPY 233
>AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical
protein Y45G12C.1 protein.
Length = 378
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/58 (20%), Positives = 28/58 (48%)
Frame = +3
Query: 270 IIYVNGTSETTDFILQEKPSAYAPEATLIQYYSYNKKIYEYNVLQIVLGELLSDLKNL 443
I+Y ++ ++++P+ + +Y Y K + EY ++L E + D +N+
Sbjct: 161 ILYSLDLTDKDILDIEKEPNVKVRKFDYSKYPKYVKNLMEYRFKALILAEAIRDFQNV 218
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 243 VYAADDKVYIIYV--NGTSETTDFILQEKPSAYAPEATLIQYYSYNKKIYEYNVLQIVLG 416
VY++ D+ +I++V NG DF+L+ + ++ L+ + + E+ + LG
Sbjct: 705 VYSSIDQNFILFVSANGGIALEDFVLESENELFSIIHQLVLSMNAAEAALEFEHRDLHLG 764
Query: 417 ELLSDLKNLLE 449
+L D + E
Sbjct: 765 NVLIDRNGVKE 775
>Z73422-7|CAA97769.2| 603|Caenorhabditis elegans Hypothetical
protein B0564.7 protein.
Length = 603
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 339 PEATLIQYYSYNKKIYEYNVLQIVLGELLSDLKNLLEDKVELIQSIA 479
P TL+ Y+K + NV++ + L+S ++ L + +L+ +A
Sbjct: 154 PFDTLVMIIRYSKSSIDQNVIESIATSLISRIEKELANPADLLAILA 200
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 243 VYAADDKVYIIYV--NGTSETTDFILQEKPSAYAPEATLIQYYSYNKKIYEYNVLQIVLG 416
VY++ D+ +I++V NG DF+L+ + ++ L+ + + E+ + LG
Sbjct: 705 VYSSIDQNFILFVSANGGIALEDFVLESENELFSIIHQLVLSMNAAEAALEFEHRDLHLG 764
Query: 417 ELLSDLKNLLE 449
+L D + E
Sbjct: 765 NVLIDRNGVKE 775
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 243 VYAADDKVYIIYV--NGTSETTDFILQEKPSAYAPEATLIQYYSYNKKIYEYNVLQIVLG 416
VY++ D+ +I++V NG DF+L+ + ++ L+ + + E+ + LG
Sbjct: 705 VYSSIDQNFILFVSANGGIALEDFVLESENELFSIIHQLVLSMNAAEAALEFEHRDLHLG 764
Query: 417 ELLSDLKNLLE 449
+L D + E
Sbjct: 765 NVLIDRNGVKE 775
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DVKDAQEIVLDYSNNLYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPF 224
++K ++++ +N+ +D P V+ D + +LG+ ENP Y L+ P F
Sbjct: 416 ELKTYEDLIDLIDSNILKSLRDLYPDVLDVDLI--LLGIAENPVYGSLLGPTF 466
>AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical
protein Y39G10AR.5 protein.
Length = 917
Score = 26.6 bits (56), Expect = 9.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 170 LFNAVFGYNIRCFIFTIEVQVVRII 96
L++A +G+ I C+IF+ VQ+ +
Sbjct: 115 LYSASWGFLIACYIFSTRVQIASFV 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,085,896
Number of Sequences: 27780
Number of extensions: 231822
Number of successful extensions: 737
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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