Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_P16
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    27   0.14 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   5.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.2  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   5.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.9  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   9.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.1  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   9.1  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   9.1  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 102 SNNLYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFIVEDGAVYAADDKVYII-- 275
           ++ LY     K   ++ +D V+    + E        KPPF+V+  + +   D++Y +  
Sbjct: 8   TDELYAIKILKKDIIIQDDDVE--CTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVME 65

Query: 276 YVNG 287
           YVNG
Sbjct: 66  YVNG 69


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = +2

Query: 137 TLCCNXXXXXKDSRFTRES---NLRTSDK 214
           T+CC      + S  TRES   N  +SDK
Sbjct: 342 TICCKTRIIGRRSWVTRESQICNNSSSDK 370


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 294 ETTDFILQEKPSAYAPEATLIQYYSYNKKI--YEYNVLQIVLGELLSDLKNLLEDKVELI 467
           E  D  +  KP     +  LI+    ++ +  +E N+L+ ++G+L  D +     KV  +
Sbjct: 96  ELRDLPISGKPFQIRMKHGLIRDLIVDRDVPTWEVNILKSIVGQLQVDTQGENAVKVNSV 155

Query: 468 Q 470
           Q
Sbjct: 156 Q 156


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -1

Query: 272 DID-FVISRVYRSIFNDKWWL 213
           +ID FV++R+  +I N+ W L
Sbjct: 4   EIDGFVLNRIQYAILNEAWRL 24


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 383 NLLVITVVLYERGFRSVRTRFLLKNKIGRL 294
           N+LV   +  +RG R +   FL    I  L
Sbjct: 43  NILVCVAIYTDRGLRRIGNLFLASLAIADL 72


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 360 YYSYNKKIYEYNVL 401
           Y +YNKK+Y  N +
Sbjct: 97  YNNYNKKLYYKNYI 110


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 263 FVISRVYRSIFNDKWWLYQ 207
           + I R+Y     DKW+L++
Sbjct: 265 YTIDRLYELTKIDKWFLHK 283


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 360 YYSYNKKIYEYNVL 401
           Y +YNKK+Y  N +
Sbjct: 338 YNNYNKKLYYKNYI 351


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 345 ATLIQYYSYNKKIYEYN 395
           ++L   Y+YN   Y+YN
Sbjct: 316 SSLSNNYNYNNNNYKYN 332



 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 360 YYSYNKKIYEYNVL 401
           Y +YNKK+Y  N +
Sbjct: 333 YNNYNKKLYYKNYI 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,707
Number of Sequences: 438
Number of extensions: 3083
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)