Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_P15
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           33   0.006
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.3  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.2  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 33.1 bits (72), Expect = 0.006
 Identities = 20/77 (25%), Positives = 32/77 (41%)
 Frame = +2

Query: 179 LEGHQGEIFTAKFHPEGKHLASGGFDRQIFIWNVYGQCENVMVMKGHTGAIMELCFSPDG 358
           L GH+ ++   K++   + LAS      IF+W  Y    +V ++      +    +S DG
Sbjct: 60  LRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWSVELINDRNTPVTHFSWSHDG 119

Query: 359 SHLYTCATDNTVAVWDV 409
                C  D  V V  V
Sbjct: 120 RMALICYQDGFVLVGSV 136


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -1

Query: 441 PFNFLILIPVGTSQTATVLSVAHVYKCEPSGEKHSSMIAPV*PFITITFSHC 286
           PF   +   V  +Q  +VL  A+      SG+++ +++ P+ P IT T S C
Sbjct: 204 PFGLAMCRLVNYTQAVSVLVSAYTLVAI-SGDRYIAIMWPLRPRITKTCSKC 254


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 420 IPVGTSQTATVLSVAHVYKCEPSGEKHSSMI 328
           IP G S++AT  S+  +   +    +HS+ I
Sbjct: 255 IPAGPSKSATNHSINSIQSNDSGSRRHSAEI 285


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 334 HDSTSVTFHHHHI 296
           H + +V  HHHH+
Sbjct: 866 HQAAAVAAHHHHL 878


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,562
Number of Sequences: 2352
Number of extensions: 12236
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)