Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P12
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80441-10|AAB37658.1| 269|Caenorhabditis elegans Hypothetical p... 33 0.11
Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical pr... 31 0.35
U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.4
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 2.4
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.4
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.4
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.4
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.4
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.4
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical pr... 28 3.2
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 3.2
Z83129-5|CAB05643.1| 349|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z83129-3|CAB05641.1| 300|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 27 5.7
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical p... 27 5.7
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 27 5.7
U53154-7|AAC25857.1| 356|Caenorhabditis elegans Nuclear hormone... 27 7.5
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical ... 27 7.5
AF273783-1|AAG15132.1| 358|Caenorhabditis elegans nuclear recep... 27 7.5
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 27 9.9
>U80441-10|AAB37658.1| 269|Caenorhabditis elegans Hypothetical
protein F27C1.1 protein.
Length = 269
Score = 33.1 bits (72), Expect = 0.11
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +2
Query: 320 TCMEESLTLLEPR-DSHVRKINEMDKQKTKLLDELTDYETNL-SKSDVQVTNTRVDVELC 493
T + L ++E + + + K+NE++ K + +L+DY+ N+ S +D QV + VDV +
Sbjct: 9 TAFGQFLKMVELQMEQEMEKMNEIETDKLPIDHQLSDYQNNIESGNDRQVQSCPVDVSIP 68
Query: 494 K 496
K
Sbjct: 69 K 69
>Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical
protein C31C9.3 protein.
Length = 377
Score = 31.5 bits (68), Expect = 0.35
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 269 RIAEVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKI 379
++ ++ E +K+ T CMEE LT+LE + HV I
Sbjct: 188 KLEKLRLDFLEHNKEDTQCMEELLTVLENSEPHVLNI 224
>U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical
protein B0310.2 protein.
Length = 413
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 320 TCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD-YETNLSKSDVQVTNTR 475
TC E+ +TLLE H R + Q++K+ +++T + LS+ D + TR
Sbjct: 27 TCSEQEMTLLESAIVHARDSLLEEIQRSKISEDVTQTVDCLLSRVDELLEETR 79
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 ETELRKRIAEVSTQLQECSKQQTTCMEESL-TLLEPRDSHVRKINEMDKQKTKLLDELTD 427
E + K + E + + +E ++ + + L E RK++E+D + +L E+ +
Sbjct: 407 ELQKMKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLHELDLENARLAGEIRE 466
Query: 428 YETNLSKSDVQ 460
+T L ++D Q
Sbjct: 467 LQTALKEADAQ 477
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 ETELRKRIAEVSTQLQECSKQQTTCMEESL-TLLEPRDSHVRKINEMDKQKTKLLDELTD 427
E + K + E + + +E ++ + + L E RK++E+D + +L E+ +
Sbjct: 407 ELQKMKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLHELDLENARLAGEIRE 466
Query: 428 YETNLSKSDVQ 460
+T L ++D Q
Sbjct: 467 LQTALKEADAQ 477
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 ETELRKRIAEVSTQLQECSKQQTTCMEESL-TLLEPRDSHVRKINEMDKQKTKLLDELTD 427
E + K + E + + +E ++ + + L E RK++E+D + +L E+ +
Sbjct: 423 ELQKMKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLHELDLENARLAGEIRE 482
Query: 428 YETNLSKSDVQ 460
+T L ++D Q
Sbjct: 483 LQTALKEADAQ 493
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/50 (20%), Positives = 29/50 (58%)
Frame = +2
Query: 278 EVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD 427
++ QL ++++ + + L ++ RK+ +++K++ +L+ E+TD
Sbjct: 1470 DLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITD 1519
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/50 (20%), Positives = 29/50 (58%)
Frame = +2
Query: 278 EVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD 427
++ QL ++++ + + L ++ RK+ +++K++ +L+ E+TD
Sbjct: 1470 DLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITD 1519
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/50 (20%), Positives = 29/50 (58%)
Frame = +2
Query: 278 EVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD 427
++ QL ++++ + + L ++ RK+ +++K++ +L+ E+TD
Sbjct: 1230 DLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITD 1279
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/50 (20%), Positives = 29/50 (58%)
Frame = +2
Query: 278 EVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD 427
++ QL ++++ + + L ++ RK+ +++K++ +L+ E+TD
Sbjct: 1470 DLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITD 1519
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 DVHYFRCL-HFVSTFTSK*LEFGNRITEKNRRSEYTITRVFKATNNLHG 330
D +F+C + +T T+ + T N+R+E T T V+ T LHG
Sbjct: 88 DFTFFQCFTNQATTTTTPTFRAKFKFTVFNQRTEETPTTVYSGTQQLHG 136
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 DVHYFRCL-HFVSTFTSK*LEFGNRITEKNRRSEYTITRVFKATNNLHG 330
D +F+C + +T T+ + T N+R+E T T V+ T LHG
Sbjct: 95 DFTFFQCFTNQATTTTTPTFRAKFKFTVFNQRTEETPTTVYSGTQQLHG 143
>Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical
protein B0464.6 protein.
Length = 643
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 251 ETELRKRIAEVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINE-MDKQ 397
E E+R + E+ T+ Q+ + T T+LEP H+ K+N+ +DK+
Sbjct: 376 ENEIRYQTGELLTEDQQKRAEFMTRAWIRNTILEPLAEHIDKVNKILDKE 425
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 251 ETELRKRIAEVSTQ----LQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDE 418
+ +++K + EV Q L E ++ MEE E + RK NE K+ K+ D
Sbjct: 872 KVKVQKELEEVEKQGREKLLEKEREFRKTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDV 931
Query: 419 LTDYETNLSKSDVQVTN 469
L +YE + + +++ T+
Sbjct: 932 LREYERKIEQLNMEKTD 948
>Z83129-5|CAB05643.1| 349|Caenorhabditis elegans Hypothetical
protein W06G6.8 protein.
Length = 349
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 288 VLTSAILFRNSVSKLQLFRSESTNKMQAAKIMYIGQRRMFSIPII 154
+ SA+ NS S + S STN +AAK+++ R+ S ++
Sbjct: 295 IFLSALFCLNSASHCLINFSMSTNYRKAAKMVFFANRKQSSTSVL 339
>Z83129-3|CAB05641.1| 300|Caenorhabditis elegans Hypothetical
protein W06G6.6 protein.
Length = 300
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 288 VLTSAILFRNSVSKLQLFRSESTNKMQAAKIMYIGQRRMFSIPII 154
+ SA+ NS S + S STN +AAK+++ R+ + ++
Sbjct: 252 IFLSALFCLNSASHCLINFSMSTNYRKAAKMVFFANRKQMNTSVL 296
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 254 TELRKRIAEVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD 427
TEL+ + E S QLQ+ + + E+ L+ + ++N++ + K++L +L +
Sbjct: 1266 TELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLTSQLEE 1323
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 254 TELRKRIAEVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD 427
TEL+ + E S QLQ+ + + E+ L+ + ++N++ + K++L +L +
Sbjct: 1266 TELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLTSQLEE 1323
>Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical
protein C01G10.15 protein.
Length = 100
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 223 Y*QNASSENNVHRPTTHVFYPHNKMNN 143
Y N + NN + TT+ +YP+N NN
Sbjct: 26 YPNNGYNNNNNNGYTTYYYYPNNNNNN 52
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 254 TELRKRIAEVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTD 427
TEL+ + E S QLQ+ + + E+ L+ + ++N++ + K++L +L +
Sbjct: 1269 TELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLTSQLEE 1326
>U53154-7|AAC25857.1| 356|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 42 protein.
Length = 356
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 359 DSHVRKINEMDKQKTKLLDELTDYETNL 442
D + I + K K+++ELTDYE N+
Sbjct: 277 DQNEECIEVCKQMKAKIIEELTDYEKNV 304
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +2
Query: 260 LRKRIAEVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTDYETN 439
L+ I + + +K++ E + LLE + K+N ++K K KL L + E
Sbjct: 988 LQDEIQSQDEVISKLNKEKKHQEEVNRKLLEDIQAEEDKVNHLNKTKAKLESTLDELEDT 1047
Query: 440 LSK 448
L +
Sbjct: 1048 LER 1050
>AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical
protein Y5F2A.4 protein.
Length = 454
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 314 QTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTDYETNLSKSDVQVTNTRVDVELC 493
+T+C+++ + +P DS+ R+ ++D+ K T SD V N+R +E
Sbjct: 178 ETSCLKKFAFVCKPCDSYFRQRVQLDRHIKKAHFHPTKCSKCEQISDTPVQNSRHSLECV 237
Query: 494 K 496
K
Sbjct: 238 K 238
>AF273783-1|AAG15132.1| 358|Caenorhabditis elegans nuclear receptor
NHR-42 protein.
Length = 358
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 359 DSHVRKINEMDKQKTKLLDELTDYETNL 442
D + I + K K+++ELTDYE N+
Sbjct: 279 DQNEECIEVCKQMKAKIIEELTDYEKNV 306
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 272 IAEVSTQLQECSKQQTTCMEESLTLLEPRDSHVRKINEMDKQKTKLLDELTDYETNLSKS 451
+ E + L+E KQ+T E+ + E + H + + M+ + TKL D L + LSK
Sbjct: 318 LTEENHNLKEQLKQKTDA--ETKMIAEMKKKHRGERHYMNSRITKLEDALEYKDNQLSKR 375
Query: 452 DV 457
++
Sbjct: 376 EI 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,390,891
Number of Sequences: 27780
Number of extensions: 162831
Number of successful extensions: 522
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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