Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_P10
         (529 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   136   6e-34
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    28   0.17 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.1  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   3.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  136 bits (328), Expect = 6e-34
 Identities = 66/175 (37%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
 Frame = +3

Query: 9   EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 188
           E FE +   + V   ++   Y  PTPIQ    PI ++G++L+  AQTGSGKT A++LP I
Sbjct: 174 ESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMI 233

Query: 189 VHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
            H+ + +  +  R   P  +++APTRELA QI     +F + + ++    +GG   + Q 
Sbjct: 234 HHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQL 293

Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
           + +  G  +++ATPGRL+DF+++G    +   ++VLDEADRMLDMG  P I  ++
Sbjct: 294 QLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVM 348


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 105 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 230
           P+A + K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 451 PVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 7/27 (25%)
 Frame = +1

Query: 442 TYKDAPI*FLMKLI-------ACWIWV 501
           T+KD  + FLMK+I        CW+W+
Sbjct: 769 TFKDKALEFLMKMIDIFCVWDCCWVWL 795


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 411 LIDFLEKGTTNLQRCTYLVLDEADR 485
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 21  EANFPDYVCQAIKSMGYK 74
           +AN  DY C +  S+G+K
Sbjct: 280 DANASDYFCSSTSSVGFK 297


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 21  EANFPDYVCQAIKSMGYK 74
           +AN  DY C +  S+G+K
Sbjct: 280 DANASDYFCSSTSSVGFK 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,871
Number of Sequences: 2352
Number of extensions: 12757
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)