Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P10
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 220 4e-58
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 191 3e-49
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 179 1e-45
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 177 5e-45
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 163 9e-41
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 163 9e-41
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 163 9e-41
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 161 2e-40
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 152 2e-37
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 139 1e-33
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 120 8e-28
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 120 8e-28
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 118 3e-27
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 118 3e-27
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 118 3e-27
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 116 1e-26
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 116 1e-26
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 116 1e-26
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 115 2e-26
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 115 2e-26
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 113 7e-26
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 111 4e-25
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 111 4e-25
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 109 2e-24
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 107 5e-24
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 107 5e-24
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 105 1e-23
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 98 3e-21
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 98 4e-21
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 97 5e-21
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 97 5e-21
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 93 8e-20
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 93 8e-20
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 93 1e-19
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 92 3e-19
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 83 9e-17
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 83 9e-17
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 82 2e-16
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 79 1e-15
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 74 6e-14
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 74 7e-14
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 70 9e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 70 9e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 70 9e-13
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 58 3e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 56 1e-08
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 54 6e-08
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 50 8e-07
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 40 0.001
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.002
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 38 0.003
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 38 0.004
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 38 0.004
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.22
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.67
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 0.67
U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical pr... 29 1.6
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 1.6
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 1.6
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82085-5|CAB04989.1| 342|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical... 27 8.3
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 220 bits (538), Expect = 4e-58
Identities = 102/171 (59%), Positives = 136/171 (79%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F EA P + + + ++ PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VH
Sbjct: 132 FNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVH 190
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
I Q +RG+GP LVL PTRELAQQ+Q+V+ +F +S ++ TC+FGGA K QARDLE
Sbjct: 191 ITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLE 250
Query: 375 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
RGV+IV+ATPGRL+DFL+ GTTN+++C+YLVLDEADRMLDMG EPQI+ II
Sbjct: 251 RGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKII 301
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 191 bits (465), Expect = 3e-49
Identities = 88/176 (50%), Positives = 125/176 (71%), Gaps = 4/176 (2%)
Frame = +3
Query: 12 HFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 191
++EEA FPD V QA+K +GY +PTPIQ Q PI + ++++GVA+TGSGKT A++LP +V
Sbjct: 302 NWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLV 361
Query: 192 HINNQPPIRRGD----GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQ 359
I + P + R + GP A+++APTRELAQQI++ ++FG ++ V GGA + +Q
Sbjct: 362 WITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQ 421
Query: 360 ARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
L GVE+VIATPGRL+D LE L +CTY++LDEADRMLDMG EP ++ ++
Sbjct: 422 GMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVL 477
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 179 bits (436), Expect = 1e-45
Identities = 82/171 (47%), Positives = 119/171 (69%), Gaps = 1/171 (0%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F +F + +AI+ Y+ PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVH
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
I +QP ++ G+GP+A+++ PTRELA Q+ Q A +F + C +GG K EQ+ +L+
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQ 386
Query: 375 -RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
G E+V+ TPGR+ID ++ G TN R T+LV DEADRM DMG E Q+++I
Sbjct: 387 NEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSI 437
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 177 bits (430), Expect = 5e-45
Identities = 85/161 (52%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Frame = +3
Query: 54 IKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 233
+K Y PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +QP + GDGP
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGP 378
Query: 234 IALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 413
IA++LAPTRELA Q + A++F ++ C +GG EQ DL+RG EIV+ TPGR+
Sbjct: 379 IAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRM 438
Query: 414 IDFLEKGT---TNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
ID L + TNL+R TYLVLDEADRM D G EPQI ++
Sbjct: 439 IDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVV 479
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 163 bits (395), Expect = 9e-41
Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 11/184 (5%)
Frame = +3
Query: 9 EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 188
EHF EA F V + + GY PTP+Q P ++ ++L+ AQTGSGKT A++LP I
Sbjct: 139 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 198
Query: 189 VHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFG 338
HI +PP RR P ALVL+PTRELA QI + A++F S ++ ++G
Sbjct: 199 QHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYG 258
Query: 339 GAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQI 515
G R+Q L G I+IATPGRLID +E+G L C YLVLDEADRMLDMG EPQI
Sbjct: 259 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQI 318
Query: 516 RNII 527
R I+
Sbjct: 319 RKIV 322
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 163 bits (395), Expect = 9e-41
Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 11/184 (5%)
Frame = +3
Query: 9 EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 188
EHF EA F V + + GY PTP+Q P ++ ++L+ AQTGSGKT A++LP I
Sbjct: 123 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 182
Query: 189 VHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFG 338
HI +PP RR P ALVL+PTRELA QI + A++F S ++ ++G
Sbjct: 183 QHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYG 242
Query: 339 GAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQI 515
G R+Q L G I+IATPGRLID +E+G L C YLVLDEADRMLDMG EPQI
Sbjct: 243 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQI 302
Query: 516 RNII 527
R I+
Sbjct: 303 RKIV 306
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 163 bits (395), Expect = 9e-41
Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 11/184 (5%)
Frame = +3
Query: 9 EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 188
EHF EA F V + + GY PTP+Q P ++ ++L+ AQTGSGKT A++LP I
Sbjct: 120 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 179
Query: 189 VHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFG 338
HI +PP RR P ALVL+PTRELA QI + A++F S ++ ++G
Sbjct: 180 QHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYG 239
Query: 339 GAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQI 515
G R+Q L G I+IATPGRLID +E+G L C YLVLDEADRMLDMG EPQI
Sbjct: 240 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQI 299
Query: 516 RNII 527
R I+
Sbjct: 300 RKIV 303
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 161 bits (392), Expect = 2e-40
Identities = 81/164 (49%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Frame = +3
Query: 54 IKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD- 227
I+ G++ P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDE 158
Query: 228 ----GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVI 395
P LVL+PTRELAQQI+ ++ + Y ++ C++GG + EQ GVEIVI
Sbjct: 159 EQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVI 217
Query: 396 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
ATPGRL D G +L TY+VLDEADRMLDMG E IR I+
Sbjct: 218 ATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRIL 261
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 152 bits (368), Expect = 2e-37
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 10/180 (5%)
Frame = +3
Query: 15 FEEANFPDYVCQAI-KSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 191
F E FP + + + K G PT IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++
Sbjct: 191 FLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250
Query: 192 HINNQP---PIRRGDGPIALVLAPTRELAQQIQQVASEF----GNSSY--VRNTCVFGGA 344
Q P R +GP L++ P+RELA+QI + E G + +R GG
Sbjct: 251 FCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGV 310
Query: 345 PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMG E +I++I
Sbjct: 311 PIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSI 370
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 139 bits (337), Expect = 1e-33
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 12/183 (6%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F + + +++ + IK+ GY PTP+Q P G++L+ AQTGSGKT A+++P +
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 195 INNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGG 341
I P R+ P ALVL+PTREL+ QI + +F + + + ++GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 342 APK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIR 518
++Q L G I+IATPGRLID +++G ++ C YLVLDEADRMLDMG EPQIR
Sbjct: 288 RENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIR 347
Query: 519 NII 527
I+
Sbjct: 348 QIV 350
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 120 bits (288), Expect = 8e-28
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F +++ P + + ++ GY TPIQ P+ GK+++ AQTGSGKT A++LP +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 195 INNQPPIRRG-DG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
+ + + G +G P ++L PTRELA QI +F S + V+GG
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MG P+I II
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQII 475
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 120 bits (288), Expect = 8e-28
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F +++ P + + ++ GY TPIQ P+ GK+++ AQTGSGKT A++LP +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 195 INNQPPIRRG-DG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
+ + + G +G P ++L PTRELA QI +F S + V+GG
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MG P+I II
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQII 475
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 118 bits (284), Expect = 3e-27
Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 195 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
+ + + G+G P ++L PTRELA QI +F + + V+GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG I I+
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIV 518
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 118 bits (284), Expect = 3e-27
Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 195 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
+ + + G+G P ++L PTRELA QI +F + + V+GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG I I+
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIV 518
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 118 bits (284), Expect = 3e-27
Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 195 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
+ + + G+G P ++L PTRELA QI +F + + V+GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG I I+
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIV 518
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 116 bits (279), Expect = 1e-26
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 TREHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 182
T + F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 550 TCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 183 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 350
+ + ++ + G+G P ++L PTREL QI +F + + V+GG
Sbjct: 610 IMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
Query: 351 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG I I+
Sbjct: 670 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIV 729
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 116 bits (279), Expect = 1e-26
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 TREHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 182
T + F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 550 TCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 183 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 350
+ + ++ + G+G P ++L PTREL QI +F + + V+GG
Sbjct: 610 IMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
Query: 351 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG I I+
Sbjct: 670 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIV 729
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 116 bits (279), Expect = 1e-26
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 TREHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 182
T + F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 550 TCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 183 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 350
+ + ++ + G+G P ++L PTREL QI +F + + V+GG
Sbjct: 610 IMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
Query: 351 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGSEPQIRNII 527
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG I I+
Sbjct: 670 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIV 729
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 115 bits (276), Expect = 2e-26
Identities = 60/158 (37%), Positives = 93/158 (58%)
Frame = +3
Query: 42 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 221
V +AI+ G+ PTPIQ + P M GK++V +++TGSGKT A+++P + + R
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RD 90
Query: 222 GDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIAT 401
G AL+++PTRELA Q +V E G + +R C+ GG EQ + +I++AT
Sbjct: 91 TTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLAT 150
Query: 402 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQI 515
PGRL+ + + L Y+V DEADR+ +MG + Q+
Sbjct: 151 PGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQL 188
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 115 bits (276), Expect = 2e-26
Identities = 60/158 (37%), Positives = 93/158 (58%)
Frame = +3
Query: 42 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 221
V +AI+ G+ PTPIQ + P M GK++V +++TGSGKT A+++P + + R
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RD 90
Query: 222 GDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIAT 401
G AL+++PTRELA Q +V E G + +R C+ GG EQ + +I++AT
Sbjct: 91 TTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLAT 150
Query: 402 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQI 515
PGRL+ + + L Y+V DEADR+ +MG + Q+
Sbjct: 151 PGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQL 188
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 113 bits (272), Expect = 7e-26
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F E +C A + +G+ P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
+ + P LVL PTRELA QI Q G+ + + GG QA L
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160
Query: 375 RGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
R I++ATPGRL+D LE KG NL+ +L++DEADR+L+M E ++ I+
Sbjct: 161 RRPHIIVATPGRLVDHLENTKG-FNLKALKFLIMDEADRILNMDFEVELDKIL 212
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 111 bits (266), Expect = 4e-25
Identities = 60/172 (34%), Positives = 94/172 (54%)
Frame = +3
Query: 9 EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 188
E F++ + + + I G++ P+ IQ + +GK+++ AQ+G+GKT + + +
Sbjct: 29 ESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSIL 88
Query: 189 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARD 368
I+++ P + ALV+APTRELAQQIQ+V S G V GG R+ R
Sbjct: 89 QRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
Query: 369 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
LE G+ +V+ TPGR+ D + + + R VLDEAD ML G + QI +
Sbjct: 144 LEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEV 195
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 111 bits (266), Expect = 4e-25
Identities = 60/172 (34%), Positives = 94/172 (54%)
Frame = +3
Query: 9 EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 188
E F++ + + + I G++ P+ IQ + +GK+++ AQ+G+GKT + + +
Sbjct: 29 ESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSIL 88
Query: 189 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARD 368
I+++ P + ALV+APTRELAQQIQ+V S G V GG R+ R
Sbjct: 89 QRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
Query: 369 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
LE G+ +V+ TPGR+ D + + + R VLDEAD ML G + QI +
Sbjct: 144 LEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEV 195
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 109 bits (261), Expect = 2e-24
Identities = 59/161 (36%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Frame = +3
Query: 48 QAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 227
+A++ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 228 GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 407
G ++++PTREL+ Q V SE S + V GG+ + + L +GV I++ATPG
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPG 199
Query: 408 RLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGSEPQIRNII 527
RL+D L+ L R L++DEADR+LD+G E +++ ++
Sbjct: 200 RLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVL 240
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 107 bits (257), Expect = 5e-24
Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Frame = +3
Query: 3 TREHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 182
T + F + ++ Q +++M K TP+QA P + G +++G A+TG+GKTLA+ +P
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIP 146
Query: 183 AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
+ ++ P G AL+L PTRELA QI + + G ++ + + GG QA
Sbjct: 147 ILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQA 201
Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGSEPQIRNI 524
R+L +V+ATPGRL D +E + ++ + VLDEADRML+ Q++ I
Sbjct: 202 RELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPI 259
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 107 bits (257), Expect = 5e-24
Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Frame = +3
Query: 3 TREHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 182
T + F + ++ Q +++M K TP+QA P + G +++G A+TG+GKTLA+ +P
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIP 146
Query: 183 AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQA 362
+ ++ P G AL+L PTRELA QI + + G ++ + + GG QA
Sbjct: 147 ILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQA 201
Query: 363 RDLERGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGSEPQIRNI 524
R+L +V+ATPGRL D +E + ++ + VLDEADRML+ Q++ I
Sbjct: 202 RELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPI 259
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 105 bits (253), Expect = 1e-23
Identities = 58/159 (36%), Positives = 89/159 (55%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
FE+ + I G++ P+PIQ +A++G++++ A+ G+GKT AY +P I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
I QP ++ A+V+ PTRELA Q Q+ E ++ GG R+ L
Sbjct: 105 I--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLN 159
Query: 375 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 491
V +VIATPGR++D +EKG ++ C LVLDEAD++L
Sbjct: 160 GTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLL 198
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 98.3 bits (234), Expect = 3e-21
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Frame = +3
Query: 42 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 206
+ + +K + Y + IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 207 PPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVE 386
R+ DGP+AL+LAPTRELA QI + + ++ + +G + + ++ G +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCD 511
Query: 387 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGSEP 509
I+I T GR++DF K +L +LV DEADR+L DM +P
Sbjct: 512 ILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDP 553
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 97.9 bits (233), Expect = 4e-21
Identities = 53/137 (38%), Positives = 75/137 (54%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
FE+ N + +A GY DPTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
+ +P + LVL PTRELA Q+ QV + + GG + Q L
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 375 RGVEIVIATPGRLIDFL 425
G ++V+ATPGRLID L
Sbjct: 268 SGPDVVVATPGRLIDHL 284
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 97.5 bits (232), Expect = 5e-21
Identities = 54/170 (31%), Positives = 92/170 (54%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F++ + + + I + G++ P+ IQ + P + ++++ AQ+G+GKT + + +
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
++ Q +R AL+L+PTRELA QIQ+V G+ V+ GG E R L+
Sbjct: 88 LDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLD 142
Query: 375 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
G +V TPGR+ D + + + LVLDEAD ML+ G + Q+ +I
Sbjct: 143 YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDI 192
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 97.5 bits (232), Expect = 5e-21
Identities = 54/170 (31%), Positives = 92/170 (54%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F++ + + + I + G++ P+ IQ + P + ++++ AQ+G+GKT + + +
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
++ Q +R AL+L+PTRELA QIQ+V G+ V+ GG E R L+
Sbjct: 88 LDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLD 142
Query: 375 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
G +V TPGR+ D + + + LVLDEAD ML+ G + Q+ +I
Sbjct: 143 YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDI 192
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 93.5 bits (222), Expect = 8e-20
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Frame = +3
Query: 54 IKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG--- 224
+K M PTPIQ + M G ++V A TGSGKTLA+++P ++ + + R
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 225 --DGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLER--GVEIV 392
P L++APTREL Q A + + ++ FGG + + L + I+
Sbjct: 811 EKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNIL 870
Query: 393 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 494
+AT GRL DF+ G +L + Y+VLDEADRM+D
Sbjct: 871 VATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVD 904
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 93.5 bits (222), Expect = 8e-20
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Frame = +3
Query: 54 IKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG--- 224
+K M PTPIQ + M G ++V A TGSGKTLA+++P ++ + + R
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 225 --DGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLER--GVEIV 392
P L++APTREL Q A + + ++ FGG + + L + I+
Sbjct: 811 EKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNIL 870
Query: 393 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 494
+AT GRL DF+ G +L + Y+VLDEADRM+D
Sbjct: 871 VATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVD 904
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 93.1 bits (221), Expect = 1e-19
Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
FE+ + +K Y PT IQ +++G ++VG A+TGSGKTLA ++P ++
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLE 136
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
+ G AL+++PTRELA Q + G V GG+ + R+
Sbjct: 137 ALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRI 195
Query: 375 RGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
G+ I++ TPGRL+ + E + LVLDEADRMLDMG Q+ +II
Sbjct: 196 SGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSII 247
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 91.9 bits (218), Expect = 3e-19
Identities = 58/178 (32%), Positives = 103/178 (57%), Gaps = 13/178 (7%)
Frame = +3
Query: 33 PDYVCQAIKSMGYKDPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 197
P+ V +AI+ MG+ +PT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 198 --NNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDL 371
+ + GP AL++APTREL QI + + +++ + T + GG + +Q R +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERII 282
Query: 372 -ERGVEIVIATPGRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMGSEPQIRNII 527
++ +IV+ATPGRL +++ T + LV+DE DRM++ G ++ +I+
Sbjct: 283 SQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHIL 340
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 83.4 bits (197), Expect = 9e-17
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
FE + +K+ + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
+++ R +++ PTRE++ QI++ + + R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 375 R-GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D I II
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIII 189
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 83.4 bits (197), Expect = 9e-17
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
FE + +K+ + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 195 INNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 374
+++ R +++ PTRE++ QI++ + + R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 375 R-GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNII 527
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D I II
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIII 189
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 82.2 bits (194), Expect = 2e-16
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 194
F + + + ++I +G++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 195 INNQPPIRRGD-GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDL 371
+ + G GP A+++APT+EL QI ++ + + + E + L
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWL 210
Query: 372 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
E +V+ TPG+L+ +YLV+DEAD +L G E ++ I
Sbjct: 211 EDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKI 261
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 79.4 bits (187), Expect = 1e-15
Identities = 52/166 (31%), Positives = 94/166 (56%), Gaps = 13/166 (7%)
Frame = +3
Query: 69 YKDPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 227
+ +PT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 228 GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDL-ERGVEIVIATP 404
GP AL++APTREL QI + + +++ + T + GG + +Q R + ++ +IV+ATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 405 GRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMGSEPQIRNII 527
GRL +++ T + LV+DE DRM++ G ++ +I+
Sbjct: 128 GRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHIL 173
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 74.5 bits (175), Expect = 4e-14
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Frame = +3
Query: 42 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 221
+ +AI G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 222 GDGPIALV-LAPTRELAQQIQQVASEFGNS-SYVRNTCVFGG-APKREQARDLERGVEIV 392
DG +++V + TRELA QI + F V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 393 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGSEPQIRNII 527
+ TPGR++ G L + Y VLDE D+M+ D ++ I+
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIV 211
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 74.5 bits (175), Expect = 4e-14
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Frame = +3
Query: 42 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 221
+ +AI G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 222 GDGPIALV-LAPTRELAQQIQQVASEFGNS-SYVRNTCVFGG-APKREQARDLERGVEIV 392
DG +++V + TRELA QI + F V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 393 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGSEPQIRNII 527
+ TPGR++ G L + Y VLDE D+M+ D ++ I+
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIV 211
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 74.1 bits (174), Expect = 6e-14
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 42 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 221
+ +AI G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 51 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 105
Query: 222 GDGPIALV-LAPTRELAQQIQQVASEFGNS-SYVRNTCVFGG-APKREQARDLERGVEIV 392
DG +++V + TRELA QI + F V+ FGG A K+++ R IV
Sbjct: 106 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 164
Query: 393 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 491
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 165 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 73.7 bits (173), Expect = 7e-14
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA--- 185
F +++ + + + P+PIQ Q P +N++ A TGSGKTLA+ LP
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 186 IVHINNQPPIRRGDGP--IALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQ 359
I+ + + + +A+VL PTRELA Q +EF Y NT + E+
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELA---AQTYTEF--LKYCANTSISAANFSGEE 242
Query: 360 ARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM--GSEPQIRN 521
D++ +I+++TP R++ L+K T+ R +LV+DE+DR+ ++ G + RN
Sbjct: 243 T-DIQH-ADILVSTPNRIVFHLDKIDTSSLR--WLVVDESDRLFEVVEGQDKCFRN 294
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 73.3 bits (172), Expect = 1e-13
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Frame = +3
Query: 69 YKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 248
YK T +Q ++ ++V + TGSGKTLA++LP + I N G AL+L
Sbjct: 29 YKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALIL 86
Query: 249 APTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE-RGVEIVIATPGRLIDFL 425
+P+REL QI V F + V GG + + + + V I++ATPGRL +
Sbjct: 87 SPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQII 146
Query: 426 EKGTTNLQR----CTYLVLDEADRMLDMGSEPQIRNII 527
+ T + R LV+DEADR ++ E +R I+
Sbjct: 147 QHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREIL 184
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 70.1 bits (164), Expect = 9e-13
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAI 188
F E V +A+ +M ++ PT IQ P+ + NL+ AQ+G+GKT A++L +
Sbjct: 211 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 270
Query: 189 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGN--SSYVRNTCVFGGAPKREQA 362
I+ P + LAPT ELA+QI +V + G + + + GG +
Sbjct: 271 CRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRG 325
Query: 363 RDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 491
R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 326 RKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 70.1 bits (164), Expect = 9e-13
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAI 188
F E V +A+ +M ++ PT IQ P+ + NL+ AQ+G+GKT A++L +
Sbjct: 236 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 295
Query: 189 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGN--SSYVRNTCVFGGAPKREQA 362
I+ P + LAPT ELA+QI +V + G + + + GG +
Sbjct: 296 CRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRG 350
Query: 363 RDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 491
R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 351 RKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 70.1 bits (164), Expect = 9e-13
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAI 188
F E V +A+ +M ++ PT IQ P+ + NL+ AQ+G+GKT A++L +
Sbjct: 620 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 679
Query: 189 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGN--SSYVRNTCVFGGAPKREQA 362
I+ P + LAPT ELA+QI +V + G + + + GG +
Sbjct: 680 CRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRG 734
Query: 363 RDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 491
R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 735 RKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 58.4 bits (135), Expect = 3e-09
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Frame = +3
Query: 105 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 284
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVD 206
Query: 285 VASEFGNSSYVRNTCVFGGAPKRE-QARDLERG-VEIVIATPGRLIDFLEK---GTTNLQ 449
+ + S V GA E +AR L +++ATP RL+ L +L
Sbjct: 207 EFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLS 266
Query: 450 RCTYLVLDEADRM 488
+ +L++DEADRM
Sbjct: 267 KLRFLIVDEADRM 279
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +3
Query: 231 PIALVLAPTRELAQQIQQVASEFGN---SSYVRNTCVFGGAPKREQARDLERGVEIVIAT 401
P+ ++L PTREL QQ Q F + S +R + G + R LE G +IV+ T
Sbjct: 282 PLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGT 341
Query: 402 PGRLIDFLEKGTTNLQRCTYLVLDEADRML 491
P R+ D + G + ++V+DE D+ L
Sbjct: 342 PSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 15 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 182
FEE + A+ S+ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 54.0 bits (124), Expect = 6e-08
Identities = 41/159 (25%), Positives = 74/159 (46%)
Frame = +3
Query: 48 QAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 227
+ I G++ P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 228 GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 407
++LAP R +AQ+ + G + V TC+ + + ++ +++ TP
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL-----GFDTTAENDKISHVLMGTPK 118
Query: 408 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
DFL ++ R VLDEAD ML G + QI +
Sbjct: 119 ---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEV 154
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 50.4 bits (115), Expect = 8e-07
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +3
Query: 180 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 350
P + ++ +P + DG P A+++APT+EL QI ++ + + +
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINE 136
Query: 351 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGSEPQIRNI 524
E + LE +V+ TPG+L+ +YLV+DEAD +L G E ++ I
Sbjct: 137 EENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKI 194
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 40.7 bits (91), Expect = 6e-04
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Frame = +3
Query: 87 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 254
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 255 TRELAQQIQQVASEFGNSSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIATPG 407
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 79 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 132
Query: 408 RLIDFLEKGTTNLQRCTYLVLDEADRMLD 494
+L +E G L ++LDEAD+M+D
Sbjct: 133 KLKATIECGDVCLDNLKTIILDEADKMID 161
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 39.9 bits (89), Expect = 0.001
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Frame = +3
Query: 87 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI-VHINNQPP---IRRGDGPIALVLAP 254
+Q + G+ LV A TG GKT A+++PAI + N+ P L++A
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 255 TRELAQQIQQVASEFGNSSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIATPG 407
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 179 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 232
Query: 408 RLIDFLEKGTTNLQRCTYLVLDEADRMLD 494
+L +E G L ++LDEAD+M+D
Sbjct: 233 KLKATIECGDVCLDNLKTIILDEADKMID 261
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 39.1 bits (87), Expect = 0.002
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Frame = +3
Query: 123 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 290
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNRC 189
Query: 291 S------EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 452
+ + +R+ + + +D +I T G+L +E T L
Sbjct: 190 EVLLGLIDMEDIIPIRDIKIEKLVASYQFTKD---QCDIAFCTMGKLKASIEDKTILLDN 246
Query: 453 CTYLVLDEADRMLDM 497
++LDE+D+M+D+
Sbjct: 247 LKMMILDESDKMIDI 261
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 38.3 bits (85), Expect = 0.003
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 111 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 290
A+ GKN V VA TGSGKT I A+ HI + +G ++L P L Q +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER--TSQGKPSRVVLLVPKIPLVGQQKDRF 439
Query: 291 SEFGNSSYVRNTCVFGGAPKREQA---RDLERGVEIVIATPGRLIDFLEKGTTN 443
++ N Y N F G+ RD + + TP LI+ L+ N
Sbjct: 440 LKYCNGMYEVNG--FHGSESSVSGTGRRDEVIATHVSVMTPQILINMLQSVRQN 491
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/113 (25%), Positives = 54/113 (47%)
Frame = +3
Query: 108 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 287
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 288 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 446
AS +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/113 (25%), Positives = 54/113 (47%)
Frame = +3
Query: 108 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 287
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 288 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 446
AS +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.3 bits (70), Expect = 0.22
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 66 GYKDPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 242
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 243 VLAPTRELAQQI 278
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
Score = 28.7 bits (61), Expect = 2.7
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Frame = +3
Query: 66 GYKDPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 242
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNH---LAEDGSVKL 527
Query: 243 ------VLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATP 404
+AP + L +Q++ F V + +++ ++++ TP
Sbjct: 528 DEFKIVYIAPMKSL---VQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQVIVCTP 584
Query: 405 GRLIDFLEKGTTNL--QRCTYLVLDEADRMLD 494
+ KG Q L++DE + D
Sbjct: 585 EKYDVVTRKGGERAYNQMVRLLIIDEIHLLHD 616
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 84 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 191
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 84 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 191
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical
protein R11B5.1 protein.
Length = 614
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 58 KVWVTKILPLYRLKDGQSLCQGKTWLVWPKQVQAKLW 168
+VWV +ILP + C+ W P +V+ +LW
Sbjct: 272 RVWVEQILPKWEEMKDSKRCRELWWQGVPAKVRGELW 308
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.5 bits (63), Expect = 1.6
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 4/139 (2%)
Frame = +3
Query: 123 KNLVGVAQTGSGKT-LAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 299
KN + TGSGKT +A +L + P+ +G G A + L +Q Q + E
Sbjct: 27 KNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQG-GKRAFFVVEKVNLVEQ-QAIHIEV 84
Query: 300 GNS---SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 470
S V G +EQ + +V+ T L+D + ++ L+
Sbjct: 85 HTSFKVGQVHGQTSSGLWDSKEQCDQFMKRHHVVVITAQCLLDLIRHAYLKIEDMCVLIF 144
Query: 471 DEADRMLDMGSEPQIRNII 527
DE L GS+ R+I+
Sbjct: 145 DECHHAL--GSQHPYRSIM 161
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 29.5 bits (63), Expect = 1.6
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Frame = +3
Query: 66 GYKDPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 242
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 243 ------VLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATP 404
+APT+ L +Q++ F S + + G + ++ ++++ TP
Sbjct: 330 EEFKIVYIAPTKSL---VQEMVGSF--SKRLAPFGITVGEMTGQMNKEQFMATQVIVCTP 384
Query: 405 GRLIDFLEKGTTNL--QRCTYLVLDEADRMLD 494
+ KG Q L++DE + D
Sbjct: 385 EKYDVVTRKGGERAYNQMVRLLIIDEIHLLHD 416
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 147 TGSGKTLAYILPAIVH 194
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 104 PSLSLYRGRIFVTHTFYCLTHIIWKVCL 21
P L Y + F+ TF+C+T K+CL
Sbjct: 3 PRLPRYFLKYFIIFTFFCVTFCFLKLCL 30
>Z82085-5|CAB04989.1| 342|Caenorhabditis elegans Hypothetical
protein ZK218.6 protein.
Length = 342
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 421 KSINLPGVAITISTPLSKSRACSLLGAPPNT 329
KSI ++I++S+P AC++ G PP++
Sbjct: 2 KSIQCQPLSISMSSPSVLFEACAVCGGPPSS 32
>AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical
protein Y51A2D.20 protein.
Length = 138
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Frame = +3
Query: 177 LPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQ---IQQVASEFGNSSYVRNTCVFG 338
LP V I N P +R P +P ++ Q + +A NSS + V G
Sbjct: 25 LPPRVPIRNSPMTSSLRSRPPPPPYNRSPAHKIEQNSSFFEPIAHSTPNSSILEERRVVG 84
Query: 339 GAPKREQARDLERGVE 386
KRE RD E ++
Sbjct: 85 EGEKRELVRDKEERID 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,228,158
Number of Sequences: 27780
Number of extensions: 281910
Number of successful extensions: 803
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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