Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P06
(84 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000155314F Cluster: PREDICTED: similar to ubiquitin ... 44 9e-04
UniRef50_UPI00006CFD8F Cluster: Ubiquitin family protein; n=1; T... 44 9e-04
UniRef50_Q9WR81 Cluster: Polyprotein; n=31; root|Rep: Polyprotei... 44 9e-04
UniRef50_Q9WR79 Cluster: Polyprotein; n=3; Bovine viral diarrhea... 44 9e-04
UniRef50_Q9E2W4 Cluster: Polyprotein; n=1; Bovine viral diarrhea... 44 9e-04
UniRef50_A0PDJ3 Cluster: Polyprotein; n=65; root|Rep: Polyprotei... 44 9e-04
UniRef50_A1TWA7 Cluster: Ubiquitin precursor; n=1; Acidovorax av... 44 9e-04
UniRef50_Q7RJC6 Cluster: Ubiquitin; n=1; Plasmodium yoelii yoeli... 44 9e-04
UniRef50_A0CI21 Cluster: Chromosome undetermined scaffold_187, w... 44 9e-04
UniRef50_A6SBB4 Cluster: 60S ribosomal protein L40; n=1; Botryot... 44 9e-04
UniRef50_Q868B2 Cluster: Polyubiquitin; n=3; Eukaryota|Rep: Poly... 43 0.001
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 42 0.002
UniRef50_Q0WRN6 Cluster: Polyubiquitin 4 UBQ4; n=6; Eukaryota|Re... 42 0.002
UniRef50_A2YRX2 Cluster: Putative uncharacterized protein; n=2; ... 41 0.006
UniRef50_A2Q424 Cluster: Ubiquitin; TRAF-like; n=2; Medicago tru... 40 0.014
UniRef50_Q91BI7 Cluster: Ubiquitin GP37 fusion protein; n=2; Spo... 38 0.043
UniRef50_P16709 Cluster: Ubiquitin-like protein precursor; n=19;... 38 0.043
UniRef50_Q9SYE9 Cluster: F15I1.1 protein; n=1; Arabidopsis thali... 38 0.057
UniRef50_Q9YMT1 Cluster: Viral ubiquitin; n=1; Lymantria dispar ... 37 0.075
UniRef50_Q6WMU7 Cluster: Ubiquitin-like protein Ublp94.4; n=1; A... 37 0.100
UniRef50_A2FER2 Cluster: Ubiquitin family protein; n=3; Trichomo... 37 0.100
UniRef50_Q54V68 Cluster: Putative uncharacterized protein; n=3; ... 36 0.17
UniRef50_Q0V3T0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.17
UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1; ... 36 0.23
UniRef50_Q9SHE7 Cluster: NEDD8-like protein RUB1 precursor; n=19... 35 0.30
UniRef50_Q6ZCA5 Cluster: Monoubiquitin/carboxy-extension protein... 34 0.70
UniRef50_Q22T79 Cluster: Ubiquitin family protein; n=1; Tetrahym... 33 0.93
UniRef50_Q7T2M5 Cluster: Ubquitin-like protein 2; n=8; Clupeocep... 33 1.6
UniRef50_UPI000065FB66 Cluster: E3 ubiquitin-protein ligase UHRF... 32 2.1
UniRef50_Q0C9H7 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_P11441 Cluster: Ubiquitin-like protein 4A; n=32; Eutele... 32 2.8
UniRef50_Q00UH7 Cluster: Polyubiquitin 2; n=1; Ostreococcus taur... 31 3.7
UniRef50_Q6C7B6 Cluster: Similar to sp|P48510 Saccharomyces cere... 31 3.7
UniRef50_Q0P460 Cluster: Zgc:153389; n=3; Danio rerio|Rep: Zgc:1... 31 5.0
UniRef50_Q9SYF2 Cluster: F15I1.4 protein; n=4; Arabidopsis thali... 31 5.0
UniRef50_Q9VJ33 Cluster: NEDD8 precursor; n=546; root|Rep: NEDD8... 31 5.0
UniRef50_UPI000155E27A Cluster: PREDICTED: similar to ubiquitin ... 31 6.5
UniRef50_UPI00006CB3CF Cluster: Ubiquitin family protein; n=1; T... 31 6.5
UniRef50_Q4UDK2 Cluster: Ubiquitin,putative; n=2; Theileria|Rep:... 31 6.5
UniRef50_Q4H2N4 Cluster: Ci-UHRF2 protein; n=3; Deuterostomia|Re... 31 6.5
UniRef50_Q236S9 Cluster: Ubiquitin family protein; n=2; Alveolat... 31 6.5
UniRef50_A2DZ98 Cluster: Ubiquitin family protein; n=1; Trichomo... 31 6.5
UniRef50_Q96T88 Cluster: E3 ubiquitin-protein ligase UHRF1; n=44... 31 6.5
UniRef50_A5AB45 Cluster: Remark: Dsk2p is a nuclear-enriched pro... 30 8.7
>UniRef50_UPI000155314F Cluster: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1; n=3;
Euarchontoglires|Rep: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1 - Mus
musculus
Length = 203
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 118 QRLIFAGKQLEDGRTLSDYNI 138
>UniRef50_UPI00006CFD8F Cluster: Ubiquitin family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ubiquitin family
protein - Tetrahymena thermophila SB210
Length = 1252
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 1064 QRLIFAGKQLEDGRTLSDYNI 1084
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 1140 QRLIFAGKQLEDGRTLSDYNI 1160
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 1216 QRLIFAGKQLEDGRTLSDYNI 1236
>UniRef50_Q9WR81 Cluster: Polyprotein; n=31; root|Rep: Polyprotein -
Bovine viral diarrhea virus 2 (BVDV-2)
Length = 432
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 264 QRLIFAGKQLEDGRTLSDYNI 284
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 340 QRLIFAGKQLEDGRTLSDYNI 360
>UniRef50_Q9WR79 Cluster: Polyprotein; n=3; Bovine viral diarrhea
virus 2|Rep: Polyprotein - Bovine viral diarrhea virus 2
(BVDV-2)
Length = 261
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 169 QRLIFAGKQLEDGRTLSDYNI 189
>UniRef50_Q9E2W4 Cluster: Polyprotein; n=1; Bovine viral diarrhea
virus type 2|Rep: Polyprotein - Bovine viral diarrhea
virus type 2
Length = 636
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 319 QRLIFAGKQLEDGRTLSDYNI 339
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI AGKQL+DGRTLS Y I
Sbjct: 395 QRLILAGKQLEDGRTLSAYKI 415
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF + +D RTLSDYNI
Sbjct: 471 KRLIFPANKREDARTLSDYNI 491
>UniRef50_A0PDJ3 Cluster: Polyprotein; n=65; root|Rep: Polyprotein -
Bovine viral diarrhea virus (BVDV) (Mucosal disease
virus)
Length = 630
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 362 QRLIFAGKQLEDGRTLSDYNI 382
>UniRef50_A1TWA7 Cluster: Ubiquitin precursor; n=1; Acidovorax
avenae subsp. citrulli AAC00-1|Rep: Ubiquitin precursor
- Acidovorax avenae subsp. citrulli (strain AAC00-1)
Length = 287
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 80 QRLIFAGKQLEDGRTLSDYNI 100
>UniRef50_Q7RJC6 Cluster: Ubiquitin; n=1; Plasmodium yoelii
yoelii|Rep: Ubiquitin - Plasmodium yoelii yoelii
Length = 162
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 76 QRLIFAGKQLEDGRTLSDYNI 96
>UniRef50_A0CI21 Cluster: Chromosome undetermined scaffold_187,
whole genome shotgun sequence; n=2; Eukaryota|Rep:
Chromosome undetermined scaffold_187, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 271
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 41 QRLIFAGKQLEDGRTLSDYNI 61
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF+G QL+D +TL +YN+
Sbjct: 117 QRLIFSGHQLEDEKTLLEYNV 137
>UniRef50_A6SBB4 Cluster: 60S ribosomal protein L40; n=1;
Botryotinia fuckeliana B05.10|Rep: 60S ribosomal protein
L40 - Botryotinia fuckeliana B05.10
Length = 607
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYNI
Sbjct: 520 QRLIFAGKQLEDGRTLSDYNI 540
>UniRef50_Q868B2 Cluster: Polyubiquitin; n=3; Eukaryota|Rep:
Polyubiquitin - Euglypha rotunda
Length = 177
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYN+
Sbjct: 34 QRLIFAGKQLEDGRTLSDYNV 54
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTLSDYN+
Sbjct: 112 QRLIFAGKQLEDGRTLSDYNV 132
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 43 QRLIFAGKQLEDGRTLADYNI 63
>UniRef50_Q0WRN6 Cluster: Polyubiquitin 4 UBQ4; n=6; Eukaryota|Rep:
Polyubiquitin 4 UBQ4 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 351
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 117 QRLIFAGKQLEDGRTLADYNI 137
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 238 QRLIFAGKQLEDGRTLADYNI 258
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 314 QRLIFAGKQLEDGRTLADYNI 334
>UniRef50_A2YRX2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 324
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL++GRTL+DYNI
Sbjct: 275 QRLIFAGKQLEEGRTLADYNI 295
>UniRef50_A2Q424 Cluster: Ubiquitin; TRAF-like; n=2; Medicago
truncatula|Rep: Ubiquitin; TRAF-like - Medicago
truncatula (Barrel medic)
Length = 343
Score = 39.5 bits (88), Expect = 0.014
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1
Query: 19 SRRLIFAGKQLKDGRTLSDYNI 84
S+RLIFAGKQL D RT++DYNI
Sbjct: 307 SQRLIFAGKQLDDSRTVADYNI 328
>UniRef50_Q91BI7 Cluster: Ubiquitin GP37 fusion protein; n=2;
Spodoptera litura NPV|Rep: Ubiquitin GP37 fusion protein
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 351
Score = 37.9 bits (84), Expect = 0.043
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+D T+SDYNI
Sbjct: 60 QRLIFAGKQLEDSMTMSDYNI 80
>UniRef50_P16709 Cluster: Ubiquitin-like protein precursor; n=19;
root|Rep: Ubiquitin-like protein precursor - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 77
Score = 37.9 bits (84), Expect = 0.043
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+D +T++DYNI
Sbjct: 41 QRLIFAGKQLEDSKTMADYNI 61
>UniRef50_Q9SYE9 Cluster: F15I1.1 protein; n=1; Arabidopsis
thaliana|Rep: F15I1.1 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 158
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF GKQL+DG TL+DYNI
Sbjct: 126 QRLIFKGKQLEDGLTLADYNI 146
>UniRef50_Q9YMT1 Cluster: Viral ubiquitin; n=1; Lymantria dispar
MNPV|Rep: Viral ubiquitin - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 150
Score = 37.1 bits (82), Expect = 0.075
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI+AGKQL D RTL+DYNI
Sbjct: 41 QRLIYAGKQLDDERTLNDYNI 61
>UniRef50_Q6WMU7 Cluster: Ubiquitin-like protein Ublp94.4; n=1;
Acanthamoeba castellanii|Rep: Ubiquitin-like protein
Ublp94.4 - Acanthamoeba castellanii (Amoeba)
Length = 853
Score = 36.7 bits (81), Expect = 0.100
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL++ RTL++YNI
Sbjct: 381 QRLIFAGKQLEESRTLAEYNI 401
>UniRef50_A2FER2 Cluster: Ubiquitin family protein; n=3; Trichomonas
vaginalis G3|Rep: Ubiquitin family protein - Trichomonas
vaginalis G3
Length = 378
Score = 36.7 bits (81), Expect = 0.100
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 19 SRRLIFAGKQLKDGRTLSDYNI 84
S+RLIFAGKQ++D TL DYN+
Sbjct: 254 SQRLIFAGKQMEDENTLMDYNV 275
>UniRef50_Q54V68 Cluster: Putative uncharacterized protein; n=3;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 314
Score = 35.9 bits (79), Expect = 0.17
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL++AGKQL+DGR+L +YNI
Sbjct: 106 QRLLYAGKQLEDGRSLFEYNI 126
>UniRef50_Q0V3T0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 375
Score = 35.9 bits (79), Expect = 0.17
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1
Query: 25 RLIFAGKQLKDGRTLSDYNI 84
RLIFAGKQL+DGRT++ Y I
Sbjct: 260 RLIFAGKQLEDGRTIAHYKI 279
>UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1;
Bigelowiella natans|Rep: Ubiquitin/actin fusion protein
4 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 234
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 25 RLIFAGKQLKDGRTLSDYNI 84
RLIFAGKQL+DGRTL+ NI
Sbjct: 35 RLIFAGKQLEDGRTLAHCNI 54
>UniRef50_Q9SHE7 Cluster: NEDD8-like protein RUB1 precursor; n=19;
Eukaryota|Rep: NEDD8-like protein RUB1 precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 80
Score = 35.1 bits (77), Expect = 0.30
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 16 ISRRLIFAGKQLKDGRTLSDYNI 84
+ +RLI+AGKQL D +T DYNI
Sbjct: 39 VQQRLIYAGKQLADDKTAKDYNI 61
>UniRef50_Q6ZCA5 Cluster: Monoubiquitin/carboxy-extension protein
fusion-like; n=2; Oryza sativa|Rep:
Monoubiquitin/carboxy-extension protein fusion-like -
Oryza sativa subsp. japonica (Rice)
Length = 212
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL+FAG+ L+DGRTL++Y I
Sbjct: 41 QRLMFAGRHLEDGRTLAEYGI 61
>UniRef50_Q22T79 Cluster: Ubiquitin family protein; n=1; Tetrahymena
thermophila SB210|Rep: Ubiquitin family protein -
Tetrahymena thermophila SB210
Length = 564
Score = 33.5 bits (73), Expect = 0.93
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF GK L++G TLSDYNI
Sbjct: 324 QRLIFPGKILENGYTLSDYNI 344
>UniRef50_Q7T2M5 Cluster: Ubquitin-like protein 2; n=8;
Clupeocephala|Rep: Ubquitin-like protein 2 - Carassius
auratus (Goldfish)
Length = 161
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI++GKQL+ G+ L DYNI
Sbjct: 126 QRLIYSGKQLEAGKKLQDYNI 146
>UniRef50_UPI000065FB66 Cluster: E3 ubiquitin-protein ligase UHRF1
(EC 6.3.2.-) (Ubiquitin-like PHD and RING finger
domain-containing protein 1) (Ubiquitin-like-containing
PHD and RING finger domains protein 1) (Inverted CCAAT
box-binding protein of 90 kDa) (Transcription factor
ICBP90); n=1; Takifugu rubripes|Rep: E3
ubiquitin-protein ligase UHRF1 (EC 6.3.2.-)
(Ubiquitin-like PHD and RING finger domain-containing
protein 1) (Ubiquitin-like-containing PHD and RING
finger domains protein 1) (Inverted CCAAT box-binding
protein of 90 kDa) (Transcription factor ICBP90) -
Takifugu rubripes
Length = 842
Score = 32.3 bits (70), Expect = 2.1
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL + GKQ++DG T+ DYN+
Sbjct: 43 QRLFYRGKQMEDGHTIFDYNV 63
>UniRef50_Q0C9H7 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 115
Score = 31.9 bits (69), Expect = 2.8
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 16 ISRRLIFAGKQLKDGRTLSDYNI 84
+ +RLIF GKQ+ D +T ++YN+
Sbjct: 77 VQQRLIFGGKQMADDKTAAEYNL 99
>UniRef50_P11441 Cluster: Ubiquitin-like protein 4A; n=32;
Euteleostomi|Rep: Ubiquitin-like protein 4A - Homo
sapiens (Human)
Length = 157
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL+F GK L DG+ LSDY+I
Sbjct: 41 QRLLFKGKALADGKRLSDYSI 61
>UniRef50_Q00UH7 Cluster: Polyubiquitin 2; n=1; Ostreococcus
tauri|Rep: Polyubiquitin 2 - Ostreococcus tauri
Length = 124
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 16 ISRRLIFAGKQLKDGRTLSDYNI 84
+ +RLIF GKQ+ D + DYNI
Sbjct: 66 VQQRLIFGGKQMNDEKIAKDYNI 88
>UniRef50_Q6C7B6 Cluster: Similar to sp|P48510 Saccharomyces
cerevisiae YMR276w DSK2 ubiquitin- like protein; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P48510
Saccharomyces cerevisiae YMR276w DSK2 ubiquitin- like
protein - Yarrowia lipolytica (Candida lipolytica)
Length = 343
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI++G+ LKDG T+ YNI
Sbjct: 43 QRLIYSGRVLKDGETVGSYNI 63
>UniRef50_Q0P460 Cluster: Zgc:153389; n=3; Danio rerio|Rep:
Zgc:153389 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 156
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI+ GK L+D RTL++YN+
Sbjct: 47 QRLIYQGKVLQDERTLTEYNV 67
>UniRef50_Q9SYF2 Cluster: F15I1.4 protein; n=4; Arabidopsis
thaliana|Rep: F15I1.4 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 144
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF G+ L+D + +SDYNI
Sbjct: 109 QRLIFQGRVLEDSKAISDYNI 129
>UniRef50_Q9VJ33 Cluster: NEDD8 precursor; n=546; root|Rep: NEDD8
precursor - Drosophila melanogaster (Fruit fly)
Length = 84
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF+GKQ+ D +T +DY +
Sbjct: 41 QRLIFSGKQMNDDKTAADYKV 61
>UniRef50_UPI000155E27A Cluster: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1; n=1;
Equus caballus|Rep: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1 - Equus
caballus
Length = 141
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 28 LIFAGKQLKDGRTLSDYNI 84
L F G L+DGRT SDYNI
Sbjct: 35 LAFVGTHLEDGRTRSDYNI 53
>UniRef50_UPI00006CB3CF Cluster: Ubiquitin family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ubiquitin family
protein - Tetrahymena thermophila SB210
Length = 480
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+R+IFAGKQL+D R L+ Y I
Sbjct: 63 QRIIFAGKQLEDHRILAGYGI 83
>UniRef50_Q4UDK2 Cluster: Ubiquitin,putative; n=2; Theileria|Rep:
Ubiquitin,putative - Theileria annulata
Length = 170
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF GK L++G+T++DY I
Sbjct: 135 QRLIFDGKLLENGKTIADYGI 155
>UniRef50_Q4H2N4 Cluster: Ci-UHRF2 protein; n=3; Deuterostomia|Rep:
Ci-UHRF2 protein - Ciona intestinalis (Transparent sea
squirt)
Length = 743
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL F GKQL+DG +L DY++
Sbjct: 43 QRLFFRGKQLEDGYSLFDYDV 63
>UniRef50_Q236S9 Cluster: Ubiquitin family protein; n=2;
Alveolata|Rep: Ubiquitin family protein - Tetrahymena
thermophila SB210
Length = 2194
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+R +FAGK L+D RT+ DYN+
Sbjct: 756 QRFLFAGKILEDERTVGDYNM 776
>UniRef50_A2DZ98 Cluster: Ubiquitin family protein; n=1; Trichomonas
vaginalis G3|Rep: Ubiquitin family protein - Trichomonas
vaginalis G3
Length = 271
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 25 RLIFAGKQLKDGRTLSDYNI 84
+LIF GK LK+G +S+YNI
Sbjct: 50 KLIFCGKSLKNGTKISEYNI 69
>UniRef50_Q96T88 Cluster: E3 ubiquitin-protein ligase UHRF1; n=44;
Eumetazoa|Rep: E3 ubiquitin-protein ligase UHRF1 - Homo
sapiens (Human)
Length = 793
Score = 30.7 bits (66), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL + GKQ++DG TL DY +
Sbjct: 43 QRLFYRGKQMEDGHTLFDYEV 63
>UniRef50_A5AB45 Cluster: Remark: Dsk2p is a nuclear-enriched
protein; n=2; Ascomycota|Rep: Remark: Dsk2p is a
nuclear-enriched protein - Aspergillus niger
Length = 361
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI++G+ LKD TL+ YNI
Sbjct: 55 QRLIYSGRVLKDNETLATYNI 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,932,947
Number of Sequences: 1657284
Number of extensions: 481517
Number of successful extensions: 1529
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 575,637,011
effective HSP length: 9
effective length of database: 560,721,455
effective search space used: 10092986190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -