Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P06
(84 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 44 2e-05
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 42 5e-05
09_04_0554 + 18495073-18495175,18495794-18496032 42 5e-05
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 42 5e-05
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 42 5e-05
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 42 5e-05
06_03_1149 + 28018932-28020529,28020989-28021067 42 5e-05
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 42 5e-05
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 42 5e-05
05_01_0438 + 3475017-3475484 42 5e-05
04_04_1238 + 31997671-31998816 42 5e-05
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 42 5e-05
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 42 5e-05
02_01_0464 - 3340642-3342015,3342403-3342405 42 5e-05
01_06_0033 + 25765300-25765758 42 5e-05
01_06_0031 + 25760878-25761342 42 5e-05
01_03_0108 - 12628711-12629178 42 5e-05
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 42 9e-05
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 41 2e-04
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 39 5e-04
08_01_0566 - 5028512-5029150 34 0.018
07_03_0447 + 18301421-18301520,18301900-18302060 31 0.17
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 29 0.68
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 26 3.6
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 26 4.8
12_01_0444 - 3502460-3502522,3502737-3502741,3502987-3503051,350... 25 6.3
10_08_0470 - 18151326-18151769 25 6.3
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQLKDGRTL+DYNI
Sbjct: 432 QRLIFAGKQLKDGRTLADYNI 452
Score = 39.5 bits (88), Expect = 4e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+ YNI
Sbjct: 508 QRLIFAGKQLEDGRTLAGYNI 528
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
Score = 35.1 bits (77), Expect = 0.008
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 16 ISRRLIFAGKQLKDGRTLSDYNI 84
+ +RLI+AGKQL D +T DYNI
Sbjct: 115 VQQRLIYAGKQLADDKTAKDYNI 137
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 117 QRLIFAGKQLEDGRTLADYNI 137
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 193 QRLIFAGKQLEDGRTLADYNI 213
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 269 QRLIFAGKQLEDGRTLADYNI 289
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 345 QRLIFAGKQLEDGRTLADYNI 365
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 421 QRLIFAGKQLEDGRTLADYNI 441
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 497 QRLIFAGKQLEDGRTLADYNI 517
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 81 QRLIFAGKQLEDGRTLADYNI 101
Score = 39.5 bits (88), Expect = 4e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFA KQL+DGRTL+DYNI
Sbjct: 157 QRLIFADKQLEDGRTLADYNI 177
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 69 QRLIFAGKQLEDGRTLADYNI 89
Score = 35.1 bits (77), Expect = 0.008
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 16 ISRRLIFAGKQLKDGRTLSDYNI 84
+ +RLI+AGKQL D +T DYNI
Sbjct: 143 VQQRLIYAGKQLADDKTAKDYNI 165
>05_01_0438 + 3475017-3475484
Length = 155
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>04_04_1238 + 31997671-31998816
Length = 381
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 117 QRLIFAGKQLEDGRTLADYNI 137
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 193 QRLIFAGKQLEDGRTLADYNI 213
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 269 QRLIFAGKQLEDGRTLADYNI 289
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 345 QRLIFAGKQLEDGRTLADYNI 365
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 42 QRLIFAGKQLEDGRTLADYNI 62
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 118 QRLIFAGKQLEDGRTLADYNI 138
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 194 QRLIFAGKQLEDGRTLADYNI 214
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 270 QRLIFAGKQLEDGRTLADYNI 290
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 346 QRLIFAGKQLEDGRTLADYNI 366
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 422 QRLIFAGKQLEDGRTLADYNI 442
>01_06_0033 + 25765300-25765758
Length = 152
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
Score = 28.3 bits (60), Expect = 0.90
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 25 RLIFAGKQLKDGRTLSDYNI 84
RL++ GKQL D +T+ +Y+I
Sbjct: 113 RLVYGGKQLADDKTVHEYDI 132
>01_06_0031 + 25760878-25761342
Length = 154
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
Score = 30.7 bits (66), Expect = 0.17
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 16 ISRRLIFAGKQLKDGRTLSDYNI 84
+ +RLI+ GKQL D +T DY I
Sbjct: 115 VQQRLIYGGKQLADDKTAHDYKI 137
>01_03_0108 - 12628711-12629178
Length = 155
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLEDGRTLADYNI 61
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 41.5 bits (93), Expect = 9e-05
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL DGRTL+DYNI
Sbjct: 41 QRLIFAGKQLDDGRTLADYNI 61
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL++GRTL+DYNI
Sbjct: 154 QRLIFAGKQLEEGRTLADYNI 174
>05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 39.1 bits (87), Expect = 5e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIFAGKQL+DG TL+DYNI
Sbjct: 57 QRLIFAGKQLEDGCTLADYNI 77
>08_01_0566 - 5028512-5029150
Length = 212
Score = 33.9 bits (74), Expect = 0.018
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL+FAG+ L+DGRTL++Y I
Sbjct: 41 QRLMFAGRHLEDGRTLAEYGI 61
>07_03_0447 + 18301421-18301520,18301900-18302060
Length = 86
Score = 30.7 bits (66), Expect = 0.17
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL+ AG+QL D RTL+DY I
Sbjct: 40 QRLMHAGRQLDDRRTLADYGI 60
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 28.7 bits (61), Expect = 0.68
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RL+F+G +L D RTL+ Y I
Sbjct: 218 QRLVFSGMELADDRTLASYGI 238
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLIF G+QL DG T++ I
Sbjct: 110 QRLIFEGRQLDDGDTVASCGI 130
>03_01_0224 -
1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI+ G+ LKD +TL+ Y +
Sbjct: 767 QRLIYKGRILKDEQTLASYGV 787
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 22 RRLIFAGKQLKDGRTLSDYNI 84
+RLI+ G+ LKD +TL Y +
Sbjct: 70 QRLIYKGRILKDEQTLESYGV 90
>12_01_0444 -
3502460-3502522,3502737-3502741,3502987-3503051,
3503301-3503369,3503487-3503579,3503667-3503770,
3503926-3504006,3504096-3504167,3504227-3504231,
3505788-3505865,3506849-3506978,3507216-3507406,
3507528-3507588,3507916-3508025,3508155-3508239
Length = 403
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 71 ERVRPSLSCLPAKIRRLLIRAP 6
ERV+ ++SCLPA + L +P
Sbjct: 103 ERVQEAVSCLPASLESTLAGSP 124
>10_08_0470 - 18151326-18151769
Length = 147
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 28 LIFAGKQLKDGRTLSDYNI 84
LIF G QL DG TL Y I
Sbjct: 48 LIFQGHQLDDGHTLIYYGI 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,955,906
Number of Sequences: 37544
Number of extensions: 13580
Number of successful extensions: 88
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 14,793,348
effective HSP length: 9
effective length of database: 14,455,452
effective search space used: 260198136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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